Eutrema salsugineum (saltwater cress): EUTSA_v10022519mg
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Entry
EUTSA_v10022519mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10022519mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10022519mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
EUTSA_v10022519mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
EUTSA_v10022519mg
SLIK complex
EUTSA_v10022519mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
18026073
NCBI-ProteinID:
XP_006409689
UniProt:
V4M7Z0
LinkDB
All DBs
Position
Unknown
AA seq
1730 aa
AA seq
DB search
MAFFRNYSNDAVSHNVMDENEERQNPTTFQSSPLNEDIDGTYSERGFDMNMDVQYQSDAE
PGCSIRQQNQTMMDNVAGPVDSQYQSSGRRMGVSGKWGSTFWKDCQPMGQGEGSGPAKDS
QSGYKDAEHSEDNLSIRSEKFDSENDNENENEEDKEMKKRQNGQAEVPADEMLSDEYYEQ
DEDNQSDHVHYKGYSNAMNSRSLPQTDSAIHSKSRTSRAIHNNSHYGDGNFGHNGDADMD
YEEEEDEDDPEDADFEPYDAVPGGDARKKHDQAWDVSDEDPETDDDIDLSDSEDDYDTKK
PKIRQQQGKGFRKLSSKPERKSVHASSRQKRKTSYQDDYSAEDSDNDIDEGFRSMPRRGT
TLRQNNGRSTHNIGQSSEVRSSTRSVRKVSYVESEDSEDIDDGRNRKNQKDDMEEEDCDA
IEKVLWHQPKGKGEDAHTNKKSIVPVLVSQLFDTEPDWNEMEFLIKWKGQSHLHCQWKSL
SDLQNLSGFKKVLNYTKKMTEEIRYRTALSREEIEVNDVSKEMDLDIIKQNSQVERIIAD
RISKDVLGDVVPEYLVKWQGLSYAEATWEKDVDIAFAQVAIDEYKAREASIAVQGKMVEQ
QRTKGKASLRKLEEQPEWLSGGTLRDYQLQGLNFLVNSWLNDTNVILADEMGLGKTVQSV
SMLGFLQNTQQIPGPFLVVVPLSTLANWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFY
NEKKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFST
KNKLLITGTPLQNSVEELWALLHFLDPAKFKNKDEFVQNYKNLSSFNELELANLHLELRP
HILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIV
VELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIF
SQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGGLG
INLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKRKM
VLDHLVIQKLNAEGRLEKRETKKGTNFDKNELSAILRFGAEELFKEDKNDEESKKRLLSM
DIDEILERAEQVEEKDAGESEHELLGAFKVANFCNAEDDGSFWSRWIKPESVVTAEEALA
PRAARNTKSYVDPSHHDRSQPERTSKRKKKGSEPPEPTDRSQKRRKTEYFVPSTPILEGT
TAQVRGWSYGNLPKRDAQRFYRTVMKFGNHNQIACIAEEVGGAVEAAPEEAQVELFDALV
DGCRESVETGEFESKGPVLDFFGVPVKANELLKRVQGLQLLSKRISRYDDPITQFRVLSY
LKPSNWSKGCGWNQIDDARLLLGILYHGFGNWEKIRLDESLGLTKKIAPVELQHHETFLP
RAPNLKERATALLEMELAAAGGKNANDKASRKNSKKVKDNLINQIKAPARDRKGKSGHAN
VSSTKDGPRRTQKAEPLVKEEGEMSDDEEVYEQFKEQKWMEWCEDVLGDEIKTLGRLQRL
QTTSADLPKEKVLFKIRRYLQILGRRIDEIVLEHEEDLYKQDRMTMRLWNYVSTFSNLSG
DRLNQIYSKLKQEREEEEGVGPSHLNGSSTGRNFQRQQRFKTAGNPQGSQQVHKGIDTAK
FEAWKRRRRTENNDVQSERPPITNSNSLGILGPAPSDRSHRPRQTGFPPR
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggctttctttaggaactactcgaacgatgctgtatcacataatgttatggatgaaaat
gaggagcggcaaaatcctactacttttcagagctcacctttgaatgaagatattgatggt
acatatagtgaaagaggctttgacatgaacatggacgtacagtatcaaagtgacgcagaa
ccaggatgtagtattaggcagcaaaatcagacaatgatggataatgtagctggtcccgtg
gattcccagtatcaatcttcgggaaggagaatgggtgtatctgggaagtggggttccaca
ttttggaaagactgtcagccaatgggacagggagagggctctggtccagccaaagattca
caatctggttacaaagacgcagaacattctgaagacaatctctccattcgcagcgaaaaa
tttgattctgaaaatgataatgaaaatgaaaatgaggaggacaaagaaatgaaaaagcgt
caaaacggtcaagctgaagttccagctgatgaaatgttgtctgatgaatattacgaacag
gatgaagataatcaaagcgaccatgtgcattacaaagggtatagcaatgctatgaattct
agatcactgccgcagacagattccgctatccatagcaagtcaaggacctcaagagcaatt
cacaacaatagtcactacggtgatggtaattttggccacaatggtgatgctgatatggac
tatgaagaggaagaagatgaggatgaccctgaagatgctgactttgagccctatgatgct
gttcctggtggcgatgcaaggaaaaagcatgaccaagcttgggacgtttctgatgaggat
cctgagactgatgatgatatcgatctttccgattctgaggatgactatgatacaaaaaag
cctaagattaggcagcaacaaggtaaaggtttccgaaagttaagctctaaacctgaacga
aaatcagtccatgcttctagtcgacaaaagaggaaaacatcatatcaagatgactactca
gcggaagactctgacaatgacatcgatgagggttttagaagcatgcccagaagagggaca
actctccgacaaaacaatggaaggtctacccataatataggacagagtagtgaagttcgg
agctccaccagatcagttcgtaaagtctcgtatgtggagagcgaagacagtgaagatata
gatgatgggagaaatcgaaagaaccaaaaggatgacatggaagaggaggattgtgatgct
attgaaaaagtgctttggcatcagccaaagggcaagggtgaagatgctcacacaaataaa
aaatcaatagttcctgttttagtaagccaactgtttgatactgagccagattggaatgaa
atggaattcctaataaaatggaaaggtcaatcacacttgcattgtcaatggaagtcatta
agcgatctccaaaatcttagtggcttcaagaaggtccttaactacacgaagaaaatgaca
gaggagattaggtacaggacagcactctcacgagaggagattgaggtcaatgatgtgagt
aaagaaatggatctggacatcattaagcagaatagtcaggtagaaagaataattgccgat
cgaataagcaaagatgttttaggtgatgtggtgccagaatatctagtaaagtggcaaggg
ctttcttatgctgaagcaacttgggaaaaggatgtcgatattgcatttgcacaggttgct
attgatgaatacaaggctcgtgaagcttcaattgcggtacaagggaaaatggtggaacag
cagcgtacaaaaggaaaagcaagtttgcggaagcttgaggagcagcctgagtggctgagc
ggaggtacgctacgggactatcagctgcagggtttgaattttcttgttaacagctggctt
aatgacactaatgtcattttggctgacgaaatgggtcttggtaaaactgttcagtccgtt
tcgatgcttgggtttttgcagaatacccagcaaattccaggtccatttcttgtcgtcgtg
cctttgtcaacattagctaactgggctaaagaattcagaaagtggcttcctgacatgaat
ataatagtatatgttggcacccgggcgagtcgagaggtatgtcagcaatacgagttttac
aatgaaaagaaagtcggccggcccataaaattcaatgcactgttgactacttatgaggtg
gttctaaaggataaagctgttctctccaagattaagtggatttacttgatggtggatgaa
gcacatagactgaaaaatagtgaggcacagctgtacacggcccttttggaatttagcacg
aagaataaactacttataactggtactccactacagaatagtgtcgaagaactgtgggct
ctgctccacttccttgatcctgccaagtttaagaataaggatgaattcgttcaaaactac
aagaaccttagctcatttaatgaattggagctcgccaatctccatttagaattgagaccc
catattctacgacgagtgattaaggatgttgagaagtctttgcctccaaaaattgagcgt
atactaagagttgagatgtccccgcttcagaaacaatactacaagtggatattagagcgc
aacttccatgatttaaataaaggggtgcgcggtaatcaggtttcacttctaaacattgtg
gtggagttgaagaagtgctgcaatcatcctttcttatttgaaagtgcagaccatggatat
gggggtgacataaacgataacagtaaactggataagattattctaagcagcggaaagcta
gttatcctagataagctactggttagattgcgtgagactaagcatcgtgtgcttatcttt
tcacagatggtaagaatgttagatatcctggcagaatacctgtctcttaggggattccag
ttccagagactggatggtagtactaaggcagaactgcgtcagcaggcaatggatcatttt
aacgcacctgccagtgacgacttttgctttcttctttcgactcgagcgggtggactgggt
atcaatcttgctactgctgatacagtcgttatatttgactctgattggaatccacagaat
gacctgcaggccatgagccgagcgcacagaattggacaacaagaagtcgtgaacatttat
agatttgtcactagcaaaagtgtcgaggaagagatcctggagcgcgctaaaagaaaaatg
gttcttgatcatttggttattcaaaaactgaatgcggagggtaggctggaaaaacgagaa
actaaaaagggaactaattttgacaagaacgagctttctgcaatattgagatttggagcg
gaagaactttttaaagaggacaaaaatgatgaagaaagcaaaaagcggctgttgagtatg
gacattgatgaaatcctagagagggcagagcaagtagaggaaaaggacgctggtgaatca
gaacatgaactgttgggtgcttttaaggttgccaacttttgtaatgctgaagatgatggg
tccttttggagtcgttggataaaacctgagtccgtggtcacggctgaagaagctcttgca
ccacgtgctgctaggaatacgaagagttatgtggatcctagccatcatgacaggagccag
cctgagaggacgagtaaaagaaaaaagaaaggatctgagcctccagagcctacagataga
agtcaaaagcgcagaaaaactgaatattttgttccttcaactccgatactagaggggact
acagctcaagtgagaggctggtcttatggaaatcttcctaagagagatgcgcaaagattt
tatcgaactgtcatgaagtttggtaaccacaaccaaattgcatgtattgcggaagaagtg
ggtggtgctgttgaagcagccccggaggaagcacaggttgagctatttgatgctttagtt
gatgggtgtcgggaatctgttgaaacaggagaatttgaatcaaagggtcctgtgttggat
ttctttggtgtccctgtaaaagcaaacgaattattaaaacgtgtgcaaggtctgcagctt
ttatcaaagcgcattagtcgatatgacgatccaattacacaattccgggtgttgtcatac
ctcaaaccttcaaattggtccaaggggtgcggttggaatcagatcgatgatgcgagattg
cttctgggaatactttatcatggttttgggaactgggaaaagataagattagatgagagt
cttggacttacaaagaagattgctcctgttgaacttcaacaccatgagacttttctaccc
cgtgctccaaacttaaaggagcgtgctactgcacttttggaaatggaacttgctgcagca
ggagggaaaaacgcgaatgacaaagcatcccgtaaaaattctaaaaaggttaaagataat
cttattaatcaaatcaaagcacctgcaagagaccgaaaagggaagtctggtcatgccaat
gtaagttcaacaaaagatggacctcggagaacccaaaaagctgaaccgttggtgaaggaa
gaaggagaaatgtctgatgatgaggaagtttacgagcagttcaaggagcagaaatggatg
gaatggtgtgaagatgtcctgggtgatgaaatcaaaactcttggacgtctacaaagattg
caaaccacgagtgcagatctgccaaaggagaaggtgcttttcaaaatccggagatactta
caaatccttgggcggagaatagatgaaattgttttagagcacgaagaggatttatacaag
caagatagaatgacaatgagattgtggaactatgtttcaactttctcaaatttgtccggg
gatcgactcaatcagatctactccaaattgaagcaggagagagaggaagaggaaggggtc
ggaccatcacacctcaatgggtcatccacgggtaggaacttccagaggcaacagagattt
aaaacagcagggaatccccaaggatcgcagcaggtccacaagggcattgacacagcaaag
tttgaagcatggaaaaggagaagaagaacagaaaataatgatgttcagtctgagcgacca
ccgataaccaactctaactcactgggtatactcgggcctgcaccatcagatagaagccat
cgaccacgtcaaactggatttcccccgagataa
DBGET
integrated database retrieval system
