Eutrema salsugineum (saltwater cress): EUTSA_v10022548mg
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Entry
EUTSA_v10022548mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10022548mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
EUTSA_v10022548mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
HAT_Syf1_CNRKL1_N
AEP1
Lectin_C
Motif
Other DBs
NCBI-GeneID:
18025919
NCBI-ProteinID:
XP_006409500
UniProt:
V4MEK3
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MTKTNGRDATTMIVSGARGFSSPLSVASSSSAAVTVNVTSFNVSSLSFNLNIIPCYLVRH
CSSSSSILLRPLSFSLLRHRSIYSRRSLRRLSFHGNQKPSFSQANSTAQRSVTFFEHVAG
IKESREKTIDFGDLESARNDARNFATRRVETDVEVRELEDLPEEWRRSKLAWLCKEAPSH
KAVTLVRLLNAQKKWVRQEDATYIALHCMRIRENETGFRVYRWMTQQNWYVFDFGLATKL
ADFLGKERKFTKCREVFDDILNQGRVPSESTFHILVVAYLSSSEQGCLEEACSVYNRMIQ
LGGYKPRLSLHNSLFRALVSKQGVPSSDDLKQAEFIFHNVLTTGLELQKDVYTGLIWLHS
CQDEVDIDRINSLREEMKEADFRESKEVVVSLLRAYAKEGSVEEVEKTWLELLDLDCGIP
SQAFVYKMEAYSKVGDSAKALEIFREMEKYLGGATVSGYHKIIEVLCKVQQVELAESLLK
EFVESGKKPLLPSYIEIVKMYFVLGLHEKLEMAFVECLEKCQPSQTIYNIYLDSLVKIGS
LEKAGDVFDEMKSNGTINVNARSCNTLLKGYLDSENHVKAKKIYELMSLKKYEIEPPLME
KLDYILSLVRKEVKKPLSMKLSKEQREVLVGLLLGGLQIESDKEMKSHKIKFEFRDNSQA
HVILRQHIHDQFREWLAPSSDLQEDIPFNFSSVSHSYFGFYAEHFWPKGRSEIPKLIHRW
LSPHSLAYWYMYSGFKTSSGDIILRLKGSLEGVEKVVKALRGKSMECRVKKKGKVFWIGL
QGTNSAWFWKLIEPHVLEEMKDHLKPASESMNNDGDEEQSINFDTSSDNSSDDRIDYTYQ
MKVNNVEV
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaccaacggccgcgatgcaacaacaatgatcgttagtggagctcgcggcttt
tcttcaccactctccgtcgcctcttcctcctccgccgccgtaaccgtcaacgtcacgtcc
ttcaacgtttcctctctctccttcaacctaaacatcattccctgctacctcgttagacac
tgctccagttcaagctcgattctcctccgtcccctttccttctcccttctccgccatcgc
agcatctactcgcgtcgctctctccgccgtctctccttccatgggaaccaaaaaccatcc
ttctcccaggctaattccactgctcagcgaagcgtgactttcttcgaacacgttgcaggc
atcaaagaatcgagagagaaaaccatcgatttcggggatttagagtctgcgaggaacgac
gcaaggaatttcgcgactcggagagtagagactgatgtggaagtgagagaattagaagac
ttgcctgaagaatggcgacgctcgaagcttgcttggctgtgtaaagaagctccgtcgcat
aaggccgtgacgcttgtgaggctcttgaatgctcagaagaaatgggttcgtcaagaagac
gctacttacatcgctcttcactgtatgcggattcgtgagaacgaaacaggattcagggtg
tatagatggatgacgcagcagaattggtacgtgttcgattttggtttagcgacgaagcta
gctgatttcttaggcaaagaacggaaatttacgaaatgccgagaggtattcgacgatatt
ttgaatcaagggcgtgtcccaagtgaatccacgtttcatattcttgtggttgcttatcta
agtagctcagagcaaggctgtctcgaagaagcgtgcagcgtttacaacaggatgattcag
cttggaggttacaaaccgcgtcttagtctgcataactctttgtttagagctctagttagc
aaacagggagtgccgtcgagtgatgaccttaaacaagccgagtttatcttccacaatgtt
ttgactaccggtcttgagttacagaaggatgtgtataccggattgatatggctgcatagt
tgtcaagacgaagttgacatagacaggataaactctttaagagaagagatgaaggaggcg
gattttcgagagagtaaagaagttgtggtctcgttactgagagcatatgcaaaggaagga
agcgtggaagaagttgagaagacatggcttgaactgcttgatttagactgtggtatacct
tctcaagcgtttgtgtacaaaatggaagcttattcaaaagtcggcgattctgcgaaagcg
ttggagatctttagagagatggagaagtatctaggtggtgcaacagtttctggataccac
aagatcattgaggttctatgtaaagtccagcaagtggaacttgcggaatctctcttgaaa
gagtttgtagaaagcgggaagaagccgctcttaccgtcatacatcgagatagttaaaatg
tacttcgttttgggtttacatgagaaattggagatggcttttgttgagtgcttggagaaa
tgccaacctagccagactatatataacatatacttggattcattggtaaagatcggtagc
ctcgagaaagcaggggatgttttcgatgaaatgaaaagcaacgggacaatcaatgtgaat
gcaagatcctgcaacactcttttgaagggatacctagattctgaaaatcatgtgaaggca
aagaagatatatgagctgatgagtttaaagaaatacgaaatcgagccgccgcttatggag
aagcttgattacatcctgagcttggtgagaaaagaggtgaagaaaccgttgagcatgaag
ctaagcaaagaacagcgcgaggtactggttggtttgctattaggtggcttgcaaatcgaa
tcagacaaagagatgaagagccacaaaatcaaatttgaattcagagataactctcaggct
catgtgatcctgagacaacacatacatgaccagttccgcgagtggttggctccttcgagc
gatttgcaagaggatataccgttcaacttctcttcagtttcacattcctactttggattt
tacgctgagcatttctggccaaagggtcggtctgagattccaaaactgattcatcggtgg
ctctcaccacactcactggcttattggtatatgtacagcggctttaaaacatcgtccgga
gacattatattgagattgaagggaagtctagaaggtgttgagaaggtagtgaaggctctg
agagggaagtctatggaatgtcgtgttaagaagaaaggaaaagttttctggatcggactt
cagggaacaaactcggcttggttctggaaactaatagagcctcacgtattagaagagatg
aaagatcatctgaaacctgcttctgagtcaatgaacaatgatggagatgaagaacagagc
atcaactttgacacaagctcagataatagcagcgatgataggattgattatacatatcag
atgaaagtcaacaatgttgaggtgtga
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