KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10022565mg
Entry
EUTSA_v10022565mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K18468  vacuolar protein sorting-associated protein 35
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:eus00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    EUTSA_v10022565mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:eus04131]
    EUTSA_v10022565mg
Membrane trafficking [BR:eus04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Retromer subcomplex
    EUTSA_v10022565mg
SSDB
Motif
Pfam: Vps35 SOP4
Other DBs
NCBI-GeneID: 18026191
NCBI-ProteinID: XP_006409244
UniProt: V4M6Q3
LinkDB
Position
Unknown
AA seq 787 aa
MIADGAEDEEKWLAAGAAAFKQNAFYMQRAIDSNNLKDALKYSAQMLSELRTSKLSPHKY
YDLYMRAFDELRKLEIFFTEETRRGCSVIELYELVQHAGNILPRLYLLCTAGSVYIKTKE
APAKEILKDLVEMCRGIQHPLRGLFLRSYLAQISRDKLPDIGSEYEGDADTVTDAVEFVL
LNFTEMNKLWVRMQHQGPAREKERREKERSELRDLVGKNLHVLSQLEGVDLDMYRDTVLP
RVLEQIVNCRDAIAQYYLMDCIIQVFPDDYHLQTLDVLLGACPQLQPSVDIMTVLSRLME
RLSSYAALNAEVLPYFLQVEAFSKLNNAIGKVIEAQEDMPILSAVTLYSSLLKFTLHVHP
DRLDYADQVLGSCIKQLSGKRKIDDSRATKEIVTLLSAPLEKYNDVVTALKLTNYPLVLE
YLDSETKRVMATVIIRSIMKNNTLIATAEKVEALLELISGLINDLDEPQGLEVDEDDFEE
EQNSVARLIHMLYNDDPEEMFKIISILKNHILTGGPKRLKFTVPPLVVSALKLIRRLPVE
GDNPFGKEASVSATKIFQFLNEIIEALPNVPSPDLAFRLYLQCAEAANKCDEEPIAYEFF
TQAYILYEEEISDSKAQVTALQLIIGTLQRMHVFGVENRDTLTHKAMGYSAKLLKKPEQC
RAVYGCSHLFWLEGHEAIQDGERVLRCLKRALKIANSAQQMTSAARGSTGSVTLFIEILN
KYLYFYEKGIPQITVGTVESLIQLIKNEESMTSEPSAESFFASTLRFMEFQKEKGGAIGD
RYEEIKV
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgatcgcagacggagcagaagatgaagagaaatggctcgccgccggtgcagcagctttc
aagcagaacgcattctacatgcaacgcgctattgactcgaataatctgaaggatgctctc
aagtattcggctcagatgctcagcgagttgcgaacttcgaagctttcacctcacaagtac
tatgacctctatatgcgagcttttgatgagttgaggaaacttgaaattttcttcacggaa
gagactcggcgtggctgctcagtcattgaactctatgagcttgttcagcatgctggtaac
atattaccacgtttatatctcctatgtacagcaggatccgtttatatcaaaaccaaggaa
gctcctgccaaggaaattcttaaagatcttgttgagatgtgccgtgggattcagcatcct
ctacgtggtctcttcttgagaagttaccttgcgcaaattagtcgagataaattacctgac
attggttctgagtatgaaggagatgctgatacagtcacagatgctgtggagtttgtacta
ctgaactttactgagatgaataaactctgggtcagaatgcaacaccagggacctgctcga
gaaaaggagagacgggagaaagagaggagcgagcttcgtgaccttgttggaaagaacctt
catgtgctgagtcagctagaaggtgtggaccttgatatgtacagagatacagttctccct
agagtcttagagcagatagtaaactgcagagatgcgattgcccaatattacctaatggac
tgtatcattcaagtttttcctgacgattatcacttgcagactcttgatgtacttcttggg
gcatgtccacaacttcagccatcagttgacataatgacagtgctttcacgtttaatggag
aggctttcaagttatgctgctttaaatgctgaagtactaccctatttcctgcaagtggag
gctttctcaaagttgaacaatgctattggaaaggtgatagaagcacaagaagacatgcca
attctgagtgcagtaaccctatattcctcgcttctcaagtttacactccatgttcaccct
gatcggcttgattatgcggaccaagtgttgggatcatgtattaagcaactgtccggaaaa
agaaagattgatgactcccgtgcaacaaaggagattgtcactcttttaagtgctccccta
gagaagtataatgatgttgtcaccgcccttaaactaacaaactatccccttgtattggaa
taccttgatagtgagacaaagagagtaatggctactgttataattcgaagcattatgaaa
aacaatactcttattgctacagcagaaaaggttgaagcactgcttgaactgatcagtgga
cttatcaacgatctggatgagccgcaaggtcttgaggttgatgaagatgattttgaggag
gagcagaattctgttgcgcgtctcattcacatgttatataatgatgacccggaagagatg
tttaagataatcagcatcctgaagaatcatatcctgacaggagggccaaagcgcttaaag
ttcacggttcctccgcttgtagtttctgcgctaaagctaatcaggcgactgccagtggaa
ggagacaatccttttggaaaagaggcttcggtttctgctactaaaatcttccaatttcta
aatgagatcatcgaagcactacctaatgttccatcacctgacttggcattccggttgtac
ttacaatgtgccgaggcggcgaataagtgtgatgaagagccaattgcatatgaatttttc
acacaggcatacatcttatacgaagaagaaatttcggactcaaaggcccaagtgaccgct
ttacaacttataattggaactctgcaaaggatgcacgtatttggtgttgagaatagagat
actttgacacataaggccatggggtattcagcgaaacttctaaagaaacctgaacaatgt
cgagctgtttatggatgttctcatcttttctggctcgaaggtcatgaggcaatacaagac
ggagaaagggttctgcgttgtctgaaacgagcgcttaaaattgcaaattcggctcaacag
atgaccagcgcagctcggggtagtacaggatctgttaccctcttcatcgagatcttaaac
aagtacctctatttctacgagaaagggattcctcagataacagttggaacagtcgagagc
ttgatccaactgatcaagaacgaagaatcgatgacgtctgagccatctgctgaatcgttc
tttgcaagtacgcttcgattcatggagttccaaaaggagaaaggtggtgccattggtgac
agatacgaggagatcaaagtatag

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