Eutrema salsugineum (saltwater cress): EUTSA_v10022589mg
Help
Entry
EUTSA_v10022589mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03015
mRNA surveillance pathway
eus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EUTSA_v10022589mg
09123 Folding, sorting and degradation
03018 RNA degradation
EUTSA_v10022589mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10022589mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10022589mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
EUTSA_v10022589mg
mRNA cycle factors
Stress granule specific factors
EUTSA_v10022589mg
Spliceosome [BR:
eus03041
]
Complex C
Other components
Complex C specific factors
EUTSA_v10022589mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_10
RRM_3
RBD_DEAH11
RRM_Nup35
RRM_7
RBD_AKAP-17A
Androgen_recep
Motif
Other DBs
NCBI-GeneID:
18025878
NCBI-ProteinID:
XP_006409548
UniProt:
V4NW11
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MAQVQPQGQTPNGSVPPVAAAGTGAAGAQFGTTSLYVGDLDANVTDSQLFDAFSQMGQVV
SVRVCRDLATRRSLGYGYVNFSSPQDAARAIQELNYIPLNGKPVRVMYSHRDPSVRRSGA
GNIFIKNLDKAIDHKALHDTFSAFGNIISCKVAVDSSGQSKGYGFVQYETDESAQKAMAQ
LNGMLLNDKQVYVGPFLRRQERDSTANIAKFTNVYVKNLAETTTDDELKNTFGEFGKITS
AVVMKDGDGKSKGFGFVNFDNADDAAKAVEALNGKTFDDKEWYVGRAQKKSEREMELKVR
YEQSLKEAADKFQSSNLYVKNLDDSVSDEKLKELFAPYGTVTSCKVMRDPNGISRGSGFV
AFSTPEEATKAMSEMSGKMIDNKPLYVAVAQRKEDRRVRLQAQFSQMRPVAMPPSVGPRM
QMYPPGGPGIGQQMFYGQAPPNMIPPQPGFGFQQQMVPGMRPGGAPMHNFFMPMVQQGQQ
RPGGRRPGGIQQSQQQQQQVPMMQQQHQMHPRGRMFRYPQGRGSGGPPDAPGMLPYEMPS
NMPLRDSVLSQHVPIGALATSLANASPEHQRTMLGENLYPLVEQLEAESAAKVTGMLLEM
DQTEVLHLLESPDALKAKVAEAMEVLRSVAAGGAAEQLASLNLNENLVS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcagcctcaaggtcaaactccgaacggctctgttccaccggttgcggcg
gctggtaccggagcagcgggtgctcaattcggtacgacgtcgctttacgtcggagatctg
gatgcgaatgttacggactcgcagcttttcgatgcgtttagccagatgggtcaagtcgtc
tcggttcgagtctgtagggatttggctactcggagatctctcggctatggatacgtcaac
ttcagcagtccacaagatgctgcaagagcgatccaggaactaaactacatacctcttaat
ggaaaacctgtcagggttatgtactctcatcgcgatcctagtgttcgccgaagtggtgca
ggaaacatatttatcaagaatctggacaaggccatagaccacaaagcgttgcatgatacg
ttttctgcgttcgggaacattatctcgtgcaaggtagctgtggattcttcaggtcaatca
aaaggctatgggtttgtccaatacgaaactgatgaatctgcccagaaagctatggctcaa
ctgaacggcatgttgctgaatgacaagcaagtgtatgttggacccttcctcaggaggcaa
gaaagagattctactgctaacattgcgaaattcaccaacgtgtatgtgaagaatcttgct
gaaacaactactgatgatgagttgaagaacacttttggtgagtttggaaagattacaagt
gctgtggtgatgaaagatggagatgggaagtcaaagggctttgggtttgttaactttgac
aatgccgatgatgccgccaaagctgttgaagctcttaatggaaaaacatttgatgataag
gaatggtatgttggtagagctcagaagaagtctgaaagggaaatggaacttaaggttcgg
tatgagcagagtttgaaggaagcagcagacaagtttcaaagctctaacttgtatgttaag
aacttagatgacagcgtttctgacgagaaactcaaggagctctttgcaccttacggcact
gttacatcttgcaaggtgatgcgggatcctaatggcataagcaggggctcgggttttgta
gcattctcaactccagaagaagcaaccaaagctatgtcagagatgagtggtaaaatgatt
gataacaaacctctctatgttgctgttgctcagagaaaggaggacagaagggtcagactg
caggctcagttttctcaaatgagaccagttgctatgccaccatctgttggtcctcgtatg
caaatgtatccccctggtggtcccggtatcggacaacaaatgttttatggtcaggcacct
cctaatatgattcctccacagcccgggtttggcttccagcagcagatggttcctggaatg
agacctggtggtgcaccgatgcacaacttcttcatgccaatggttcagcagggccagcaa
cgtcctggagggagacgtcctggagggatccagcaatcccagcagcaacagcagcaagtt
cccatgatgcagcagcagcaccagatgcacccgaggggtcgaatgttccgctatccgcaa
ggacgtggaagcggtggtcctcctgatgcacctggaatgcttccatatgagatgcctagt
aacatgccattgcgtgactctgtactttctcagcatgttcctattggagctttggctaca
tcccttgctaatgcttctccagaacaccagaggacgatgttgggtgagaatctgtatccg
ctggtggagcagcttgaggcagagtctgcagccaaagtgactgggatgcttttggagatg
gatcagaccgaagtgctccatcttttagagtcacctgatgctctcaaggcgaaagtagcc
gaggctatggaggttctcagaagtgtcgctgcgggtggtgcagccgagcagcttgcctcg
ttgaacctcaacgaaaaccttgtctcttaa
DBGET
integrated database retrieval system
