KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10022618mg
Entry
EUTSA_v10022618mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10022618mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10022618mg
Spliceosome [BR:eus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    EUTSA_v10022618mg
 Complex B
    EUTSA_v10022618mg
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 18026233
NCBI-ProteinID: XP_006409138
UniProt: V4NUY4
LinkDB
Position
Unknown
AA seq 521 aa
MSDNEDNGAADDGFHSGDGGGRGGEIDDHRNLKSQMEMLDNERDSSRSKESDRVKGRDKE
RDRDHERRRDREGERSKERDREEDRSRDKGMEKERDRERHHRSRHRDRSGERGERRERVR
GDDDDHRRSRDRDFERRRDYDKNRGDRRRHRSRSRSKGRSERRSRSPSKSKRVSGFDMAP
PASGMLDAGSAVTGQVPAPNLTLPGAGMFPNMYPLPTGQTFSGLPMMPIQAMTQQATRHA
RRVYVGGLSPSANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINYEKKFAFVEMRSVQE
ASNAMSLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPIPNLNLAAVGLTPGASGALEGP
DRIFVGGLPYYIPEAQIKELLESLGALKGFDLVKDRETGNSKGYAFCAYQDPSVTDIACA
ALNGITMGDKTLTVRRANQGTTQPKSEQESVLLHAQQQVAFQRIMLQQGTAATKVVCLTQ
VVTEEELRNDEEYEDIVVDMREEGGKFAFCCPTFCYKESGP
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgtctgacaacgaagataacggcgccgccgatgatggatttcactccggagatggtggt
ggacgcggcggcgagatcgacgatcaccgaaacttgaaatcccagatggaaatgcttgac
aatgagagggattcttctagaagtaaagaaagtgatagagtgaaagggagagataaagag
agagatagggaccacgagcggaggagagacagagagggagagaggagcaaggaacgtgac
agggaggaggatagaagcagggataaaggtatggagaaagaaagggatcgagagagacat
cacagaagtcgtcacagagatcgcagtggggaacgaggtgagagaagagaacgtgtcagg
ggagatgatgatgaccatcgtcgaagccgtgatcgtgactttgagaggcgtagagattat
gacaagaatagaggagatagacgccgtcaccggtctcgttctcgttcaaagggtagatct
gagcgtagatcacgatctccatccaagagtaagcgggtcagtggattcgacatggcaccc
ccagcttctgggatgttagatgctggttctgctgttacaggtcaagttcccgctccaaac
ctaactcttcccggagctggaatgtttccgaacatgtatcccttaccaactggacagaca
ttcagtggactccctatgatgccaattcaggcaatgacacagcaggctactagacatgct
cggagagtctatgttggtggtctttctccctcagcaaatgaacagtctgttgcaacattt
ttcagtcaggttatggctgctgttggcggaaacactgctggtccaggtgatgctgttgtc
aatgtgtacataaactacgagaagaagtttgcatttgtggagatgcgatctgttcaagag
gcgagtaatgcaatgtctttagatgggattatatttgagggagctccagtgaaggtgagg
agacctagtgactataacccatctctagctgcaacccttggtccaagccagccaattccc
aatttaaatttggctgctgttggtctgactccaggggcttctggtgcacttgagggacca
gaccgtatttttgttggtgggcttccctattatatccctgaggcacaaatcaaggaattg
ctggagtccttgggagccctgaagggttttgatcttgtaaaagacagagaaaccggaaac
tcaaaaggatacgcattctgcgcatatcaagatccgtctgtcacagacattgcttgtgct
gctctcaacggaattacaatgggagataaaactcttacagtgaggcgagctaaccaagga
acaactcaaccgaaatctgaacaggagagtgtattgttgcatgcacagcagcaagttgct
ttccagaggattatgctacaacagggaacagcagccaccaaagtagtgtgcctgacacaa
gtagttacagaggaagagcttagaaacgatgaggagtacgaagacattgttgtagacatg
agagaagaaggcggaaagtttgccttttgttgtcccacattctgctataaagaatcaggc
ccataa

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