Eutrema salsugineum (saltwater cress): EUTSA_v10022739mg
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Entry
EUTSA_v10022739mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03020
RNA polymerase
eus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EUTSA_v10022739mg
09124 Replication and repair
03420 Nucleotide excision repair
EUTSA_v10022739mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10022739mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10022739mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EUTSA_v10022739mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EUTSA_v10022739mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
18025887
NCBI-ProteinID:
XP_006409557
UniProt:
V4LKH8
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MEEDEGKKDFLRVSFTSSSSTNKVKKPSGFIKAKTLKKFQRSQKAPSFEMDTGASYQRFP
KVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIDINSSVLNDEFIAHR
LGLIPLTSERAMSMRLSRDCDSCDGDGQCEFCSVEFRLQAKCVTDQTLDVTSRDLYSTDP
TVTPVDFTLDSSGTDSSEQRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPASTVTFMY
EPDININEDMMDTLTEDEKIDLIESSPTKVFGIDPVTRQVVVVDPEAYTYDEEVIKKAEA
MGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSDDTVEADDQFG
ELGAHLRGG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgaaggcaagaaggacttcttaagggtttcctttacttcttcttcttcg
acgaataaagttaagaaaccctctggtttcatcaaagctaaaaccctaaaaaagttccag
aggagtcagaaagctccgagctttgagatggacactggtgcctcttaccaaagattccca
aaggtcaaaatccgtgagcttaaagatgactacgccaagttcgagcttcgtgagaccgat
gtatcaatggccaacgctctccgtcgcgttatgatctccgaggtcccaaccgttgcaatc
gatctcgtcgaaatcgacattaactcatctgtgctcaacgacgagttcatcgctcatcga
ttaggtctcatccctctcactagcgaacgcgctatgagcatgcgcttgtcccgagattgc
gattcttgtgatggagatggacagtgtgagttctgctctgttgagtttcgtctacaagct
aaatgtgtcactgaccaaaccctagatgtcactagtagggatctttacagtactgatcct
actgtcactcctgtcgatttcactctcgattcgtctggaactgattcaagcgagcaaagg
ggaattatcatagtgaagctgcgccggggacaagaattgaagcttagagcgatagctagg
aaaggaattgggaaagatcatgcaaaatggtctcctgcatctactgttacgtttatgtat
gagcctgacatcaacattaatgaagatatgatggatactttgacagaagacgaaaaaatt
gacttgattgagagcagcccgaccaaagtctttggcattgatccagtcactagacaggtt
gtggtggttgatccggaagcatacacttacgatgaagaggtgattaagaaagctgaagcc
atggggaaaccggggctcattgagatccatccgaaagatgacagttttatattcactgtt
gaatcaacaggtgcagtgaaggcttcgcagctggtactgaacgccatagatatcctgaag
cagaagcttgacgcagtccgtctctcagacgacactgtagaagccgatgatcagtttggt
gaactcggtgctcatttgcgtggaggatga
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