Eutrema salsugineum (saltwater cress): EUTSA_v10022744mg
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Entry
EUTSA_v10022744mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13175
THO complex subunit 6
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10022744mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10022744mg
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10022744mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
EUTSA_v10022744mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
EUTSA_v10022744mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
EIF3I
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
18026182
NCBI-ProteinID:
XP_006409058
UniProt:
V4NUS1
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MYGDATNWNEDEYREAILKEREVQTRTVFRTAWAPPARNPNPDAFVVASSDGTLAFHSMK
SLVSQSAGFGYSKGQDVMVAEPEGVVRAHDGPAYDVKFYGEEEDALLLSCGDDGRVRGWK
WKEIAESDASLHLQENHAKPLLELTNPQHKGPWGALSPMPEINAISVDCQSGSVFTAAGD
SSAYCWDVESGKIKMTFKGHSDYLHCVVSRSSASQILTGSEDGTARIWDCKTGKCIKVIG
SQDKRSRFRISSMALDGSESWLVCGQGKNLALWNLPASECVSTISSPAHVQDVMFDEKQI
LTVGAEPLLRRFDLNGALLNQIQCAPSSVFSVSLHQAGVVAVGGYGGLVDVISQFGSHLC
TFRSSSL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtacggagacgctacaaattggaacgaggatgagtatagagaagcaattctgaaggaa
cgagaagtacagacacgtaccgtgtttcgaaccgcctgggctcctccagcgaggaaccct
aatccggatgcctttgttgtcgcttccagcgacggaaccctagctttccattctatgaaa
tcgcttgtgtcccaatcggccggttttggctactcgaaaggtcaggacgtcatggtagct
gagcctgagggagtggttagggcacacgacggacccgcttatgatgtcaagttctatggc
gaagaagaagatgctttgctcctcagttgtggtgacgatggcagagttcgaggatggaaa
tggaaagaaattgctgaatcagatgcgtctcttcatttgcaagagaatcatgcgaagcca
ttgcttgaattgactaatccacaacacaaaggtccttggggtgctctttcaccgatgccc
gagatcaatgccatttctgttgattgtcagtcaggaagtgtatttacggcggcgggtgat
tcttcagcatattgttgggacgtggagagtggtaaaatcaaaatgaccttcaaggggcat
tcagactatttgcattgtgtagtttcacgtagttctgcaagtcagatattgacggggtca
gaggatgggactgcaagaatctgggattgcaagacagggaaatgcattaaagtaattggt
tcgcaggataaaaggtcccgctttcggattagttctatggctcttgatggaagtgaaagc
tggttggtttgtggacaaggcaaaaatttagctttatggaatctccctgcctcggaatgc
gtatcaacaatatcctcccctgctcatgtacaggatgtaatgtttgatgaaaagcagatt
ttgacagtaggagcagaaccacttctaaggcgtttcgacttaaatggagctttgcttaat
caaattcagtgtgctcctagttcagtattttccgtttccttgcatcaagcaggagtagta
gctgtgggaggttatggaggccttgttgatgtcatctctcaatttggaagccatctctgc
acatttcgtagcagctcattgtga
DBGET
integrated database retrieval system
