KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10022941mg
Entry
EUTSA_v10022941mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10022941mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10022941mg
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10022941mg
   03032 DNA replication proteins [BR:eus03032]
    EUTSA_v10022941mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     EUTSA_v10022941mg
Spliceosome [BR:eus03041]
 Complex A
  U1 snRNP components
   Sm proteins
    EUTSA_v10022941mg
  U2 snRNP components
    EUTSA_v10022941mg
 Complex B
  U1 snRNP components
    EUTSA_v10022941mg
  U4/U6.U5 tri-snRNP components
    EUTSA_v10022941mg
 Complex C
  U2 snRNP components
    EUTSA_v10022941mg
DNA replication proteins [BR:eus03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     EUTSA_v10022941mg
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 18026111
NCBI-ProteinID: XP_006409116
UniProt: V4M314
LinkDB
Position
Unknown
AA seq 88 aa
MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
SIKKNTRKPLGRILLKGDNITLMMNTGK
NT seq 267 nt   +upstreamnt  +downstreamnt
atggcgagcacgaaagtacaacgcatcatgacccaaccgatcaacttgatttttaggttt
cttcaaagtaaagctaggatccagatttggctatttgagcagaaagatctgaggattgaa
ggaagaattactggttttgacgaatacatgaatctagtgttagatgaagctgaagaagtg
agcatcaagaagaacacaaggaaaccacttggaaggattctactaaaaggagacaacata
actctgatgatgaacacgggaaagtga

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