Eutrema salsugineum (saltwater cress): EUTSA_v10023142mg
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Entry
EUTSA_v10023142mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10023142mg
Spliceosome [BR:
eus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
EUTSA_v10023142mg
Complex C
U4/U6.U5 tri-SnRNP related factors
EUTSA_v10023142mg
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
MIF4G
Gasdermin_C
Cnd1
PH_10
EloA-BP1
RVT_connect
Motif
Other DBs
NCBI-GeneID:
18025880
NCBI-ProteinID:
XP_006409550
UniProt:
V4MET3
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MDRERSHRGSRVIADKPSDEEGDRQKLLKRDRSWERDWSVGHENGKRRRHVERKDRHRRD
DRARDEKGRRHSDRYDDDSQRDKLRKEDSRQREEKSKVAKHKLPELNPSDNNDMALGKTG
GVYIPPFKLARMTKEVEDKSSVDINGLVNKVNASNIKDIIPELFAENLIRGRGLFCRSCM
KSQMASPGFTDVFAALVAVINAKFPQVAQLLLKRVVLQLKRAYKRNDKPQLLAAVKLIAH
LVNQQVAEENIALELVTLLLKDPTDDSVEVAVAFVTECGAMLQDVTPKGLFGIFERFLGI
LHEGEIDKRVQYLIEGLFAIRQARFHGHPAVRPELDLVEEKYSHDVSLDDDINPETSLDV
FKPDSDFLKTEKKYEALKKDLLGEESEDEDGSVASSEDNDEEENGSDEEQMRIRDETETN
RVNLRKTIYLTIMSSVDFEEAGHKLLKIKLEPDQEMELCIMLLECCSQERTYLRYFGLLG
QRFCMIYKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTNALPWHVLAYIRLT
EEDTTSSSRIFIKILFQELSEHLGIRLIKERLQDSTMQESLESIFPKDNPKNTRFAINFF
TSIGLGGITENLREYLKNMPRLIIQQHKQVEKSESGPSSGSDIPGSESDSESDSSSSSSS
DESHREKKKSLITQYL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggatagagagaggagtcataggggtagcagagtcatagcagataaaccttctgatgaa
gaaggtgataggcagaagcttttaaagagggatcggagctgggagagagactggtctgtt
gggcatgagaacgggaaacggcggaggcatgttgaaaggaaggataggcataggagggac
gatagagctagagatgaaaaggggaggagacacagtgatagatatgatgatgatagtcaa
agagacaagttgagaaaggaagacagcaggcaaagggaagagaagagtaaagttgcaaag
cacaagttgccagaactcaatccatctgataacaatgatatggctttgggaaaaactggt
ggagtttatattcctccttttaagctagcacgcatgacgaaggaggtggaagacaagagc
agtgtagatattaatggactggtgaataaggtcaatgcaagcaatattaaggacataatc
cctgaactgtttgcggaaaatctcatcagaggaaggggacttttctgccggtcatgtatg
aagtctcaaatggcatctcctggattcactgatgtctttgcagctttagtcgctgttatt
aacgccaaattccctcaagttgctcaacttctattgaaaagggtcgttttgcagctaaag
agagcgtataagcgtaatgacaagcctcaattactcgcagccgtaaaacttatagcacat
ctagtaaaccagcaagtcgctgaggagaacattgctcttgaactagtcactttacttcta
aaagatccgactgatgacagtgtcgaggtggctgttgcattcgtgacagagtgtggtgcg
atgcttcaggacgttacaccaaaaggattgtttgggatttttgagcggtttctcggtata
ctgcacgagggagagatagataagagagttcagtatttgattgaagggctctttgctata
aggcaagcaaggtttcatggacatccggctgttcgtcctgagctagatcttgtggaagaa
aaatattcgcatgatgtatctcttgatgatgacataaatcctgaaacctctctggatgtt
ttcaaacctgattctgacttccttaagacggaaaaaaagtacgaggcgctgaagaaggac
ttacttggtgaggagtctgaggatgaagatggctctgttgctagttcagaggataatgat
gaggaggaaaatgggtctgatgaagaacaaatgagaataagagacgagacagagactaat
cgtgttaatctaaggaagacaatatacctgaccataatgtccagcgttgattttgaggaa
gcaggtcacaagttacttaaaattaaacttgaaccagatcaagagatggaactatgcata
atgctcctggaatgttgttcccaagagagaacatatctgcgctactttggattgttgggt
cagcgtttctgtatgatctacaaaattcatcaagagaattttgagaaatgttttgttcag
cagtattccatgatccatcgtctcgagacaaacaagttgcgtaatgtggccaagttcttc
gcccatttattgggcacaaatgcacttccttggcatgtgcttgcctacatacggttaacc
gaggaagacacaacttcctcatctcgtatctttattaagatcctttttcaggaattgtca
gaacacttggggattaggctgattaaggagaggcttcaggattcaacaatgcaggaatca
cttgagtccatattccctaaagataatccaaagaacacgaggtttgcaatcaacttcttt
acttccattggtcttggaggcatcacagagaatctcagagagtacctgaagaacatgcca
cgcctcatcatacaacaacacaagcaagttgagaaatcagaatcagggccatcgtctgga
tctgatattcctggttccgagtctgattctgagtcagattcatcgtcttcctctagttcg
gatgaaagccacagagagaagaagaagagcttgatcacacaatatttatag
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