Eutrema salsugineum (saltwater cress): EUTSA_v10023215mg
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Entry
EUTSA_v10023215mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
eus03012
]
EUTSA_v10023215mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EUTSA_v10023215mg
Translation factors [BR:
eus03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
EUTSA_v10023215mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
nSTAND3
AAA_22
DND1_DSRM
T2SSE
ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
18009828
NCBI-ProteinID:
XP_006392346
UniProt:
V4KIB7
LinkDB
All DBs
Position
Unknown
AA seq
1455 aa
AA seq
DB search
MAPKKKPQKQSNKAAASSSSKSNHQKPSSGPKLQISAENEDRLRRLLLNSGRTGPPAPAP
LHSALSKNQKAKKLNNVYEKLSCEGFVDDQIELALYSLRDGATFEAALDWLCLNLPSHEL
PVKFSTGASRFPTGGGSVGVILTSREDWNEFSDSLVQYKQEEPEVFVQVKGKQDEDTLSS
GQSSQADWIREYMRRQEEEELDSWEDEVDGVGSSKEVSGPRPFDVVAKEYYSARSDAIKA
KEKRDKKGQEQAGLAIRKLKQEISALGISEATLESEFQREHAFENATEEELTYPMPDSVH
EAVSANAVSVEPLDEPDFGANPVESCGSEENKPKALPTCTMGQELVASDDNSEDLELDGI
FLEDVPPSEASPHELLELQKNEMMRELRSEKNLGKLEGIWKKGEAQKTPKAFLHQLCQRS
GWGAPKFNKITAEGRNFSYTVSILRKASGRGKSRQAGGLVTLQLPHQDEDSESIEDAQNR
VAAFSLHKIFSDLPVHFAITEPYASLVLSWKQEELLSTVQSTEEDRRANFVDRLLEADNF
SLNVSSSIDDAIPMVNTYLEEKDDQGAVKSNHRAKRNSSIEAECISLQQKHENKKKMLKY
KDMLKNRTALPITEVKNDILQYLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYC
YIICTQPRRIAAISVAQRVADERCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILL
RKLAGDKTLDDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSGDNTSRRLKVILMSATVD
ADLFSKYFAHCPVITAEGRTHPVTTHFLEEIYERTRYLLAPDSPAALRSDSSIRDKLGSV
NDRRGQKNLVLAGWGDDYLLSEDCLNPFYVSSNYTSYSDQTQQNLKRLNEDAIDYELLEE
LICHIDDTCKEGAILVFLPGVSEIHMLLDRLAASYRFRGPAADWLLPLHSSIASTEQKKV
FLRPPEDLRKVIVATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANA
RQRTGRAGRVKPGICFSLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFL
SKALEPPSEGAITSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCL
SPILSIAAFLSYKTPFVYPKDEKQNVDRVKLALLSDKLEKSSDLNNNDKQSDHLLMMVAY
EKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINIPKTGEFSGR
KKENLDVWFSDQTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITEAAVNSLTKQGNQT
KSYSAWYDGRREVHIHPSSINSNFKAFQYPFLVFLEKVETHKVYLRDTTVVSPFSILLFG
GSINVHHQSGTVTIDGWLKLAAPAQTAVLFKELRLTLHSIFKDLIRKPQKSGIVHNEVVK
SMVHLLIEEGKPQHT
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctccgaagaagaaacctcagaagcaaagcaacaaagccgctgcttcttcatcgtcg
aaatcgaaccatcagaaaccatcttcaggtcctaagcttcagatttcggcggagaacgag
gaccgtttgcgacggctcttgctcaactctggccgcaccggtcctcctgctccggcacct
ctccatagcgcgctttccaaaaatcagaaggcgaagaaactcaataatgtctacgagaag
ctctcttgcgaaggattcgtagatgatcagattgagctcgcactctattctcttagagat
ggagcgacgtttgaggctgcacttgattggctctgcttgaacttgccgagccatgagctc
ccagtgaagttttctactggagcttcccggtttcctacaggtggtggttctgtaggtgtg
attttgacctcacgggaagattggaatgagttttcggattctttagtccagtacaagcag
gaggaacctgaagtttttgttcaagtgaagggcaagcaagatgaagatactcttagttct
ggccaatcatctcaagctgattggatccgtgagtatatgagaagacaggaagaggaggaa
ttggattcttgggaagatgaggtagatggtgttggctccagcaaggaggtatctggtccg
aggcctttcgatgtggttgccaaagaatattattcggcaagatcagatgctataaaagca
aaggagaagcgtgataaaaaaggacaggagcaagcaggcctagccattcgcaagctcaag
caagagatatctgctcttggaatatctgaagcaacgttggaatctgaatttcagcgtgaa
catgcttttgaaaatgcgacagaagaggaattaacctatcccatgcccgatagtgttcat
gaggcagtaagtgctaatgctgtctctgttgagccgttagatgagccggacttcggtgca
aatcctgttgagagctgtggatctgaggaaaataaacctaaagctcttcccacatgtacc
atgggacaagaattagttgcatcggatgataattcagaggacttggagcttgacggtatt
ttcttagaggatgtccctccttctgaagcttcgccccatgaactcctggaattgcagaag
aatgaaatgatgagagaactacgcagtgagaaaaatcttgggaaactagagggcatctgg
aagaagggtgaggcgcaaaagaccccaaaggcatttctccatcaattgtgtcaaaggtca
gggtggggagcaccaaagttcaataaaataaccgctgaaggaaggaatttctcatatact
gttagcattctgcgtaaagccagtggacggggtaaaagcagacaagccgggggtctggta
actcttcaacttcctcatcaggatgaggactctgaatctatcgaggatgcacaaaacaga
gttgcagcattttcccttcataagattttttctgatttacctgttcactttgcaatcacg
gagccttacgcctctctagttttgagctggaaacaagaagaattgttgtctaccgtacaa
agcacagaagaagatcgcagagctaactttgttgataggttgcttgaggcggacaatttc
agtttgaacgtttcgtcgagcatcgacgatgcaattccaatggtaaacacctatctcgaa
gagaaagatgaccagggcgctgtcaaatctaaccacagagctaaacgaaactcctccata
gaagctgaatgtatatccctccaacaaaaacatgaaaacaaaaagaaaatgctgaagtac
aaggacatgttaaaaaatcgaactgctcttcctataacagaagtgaagaatgacatactg
cagtatctgaaagaaaaagatgtcttagtagtatgcggagaaacaggctctggaaagact
acacaggttcctcaatttatattggatgatatgatcgattcggggcatggtggatactgt
tatatcatatgcacacaacctcggcggatagctgctatctctgttgctcaaagagttgct
gatgagcgttgtgaatcctctccaggcttagatgattccttggttggttatcaagttcgt
cttgagagtgcaaggagtgacaagacaaggctgctgttttgtactactggcattctactg
agaaaactcgctggggataaaaccttggacgatgttacacatattattgtcgatgaagtg
cacgagcggtctcttttgggtgattttcttctcattattttgaagagcctgattgagaag
caatcaggcgataacacatcacgtagactgaaagttatccttatgtccgctactgttgac
gcagatctattctcaaaatattttgctcattgtcctgtgattactgctgaaggacgaaca
cacccagttactactcactttctggaggagatttatgagaggactaggtaccttctagct
ccagattctcccgctgcactaagatctgattcatccattagagacaagcttggttctgta
aacgaccgtaggggacagaagaatcttgtattggctggctggggtgatgattatttgctt
tcagaggactgtcttaacccgttttatgtttccagcaattacacctcatatagtgatcaa
acacaacaaaatctgaaaagattaaatgaggatgctatagactacgagctccttgaagag
ttgatatgccacattgatgatacttgcaaggaaggagccattcttgtatttttgccagga
gtgtcagaaattcacatgctactcgataggttagctgcttcgtatcgttttcgtggacct
gctgcagattggcttcttcctctacattcttctattgcatctacagaacagaaaaaggtg
tttctgcgcccccctgaagacctacggaaggttatcgtagctacaaatattgcagagacc
agtataacaattgatgacgtggtgtacgtgattgatagtggcaaacacaaggaaaatcgc
tataatccacagaagaaactgtcaagcatggtggaagattggatatctcaagcaaatgca
agacaaagaacaggaagagctggacgagtcaaacctggaatttgcttttcattgtacaca
cgacataggttcgagaagctaatgcgtccctatcaggttcctgagatgttgcggatgcca
ttagtagaattatgtctacaaatcaaattgcttggcttgggtcacattaagccttttctg
tcgaaggctttagaacctccgagtgaaggtgctataacctctgcaatatcattgttacac
gaggtcggtgctgttgaaggggacgaagagttgacaccacttgggcatcatttagcaaaa
cttccggttgatgtgttgattggaaagatgctgttatatggtggtatttttggttgctta
tcacctattctctcgattgctgctttcttaagctataaaacgccgtttgtatatccaaaa
gatgagaagcaaaatgttgaccgggtgaaacttgctcttttgtctgacaaactggagaaa
tcaagtgatttaaacaacaatgacaaacaatctgatcatctccttatgatggttgcatac
gaaaaatgggtgaagatactgcaagagagaggaatgaaagccgcacagaggttctgtgaa
tcaaagttcttaagcagctcagtgatgcggatgataagagacatgagagtacagtttggt
acattacttgccgacatcgggctcatcaatattcctaaaacaggagagttttcggggaga
aaaaaagagaatcttgatgtctggttttctgaccaaactcaacctttcaatatgtattca
caacaacctgaagtcgttaaggctatactatgcgcggggctatatcctaatattgcagcc
aatgataagggaattacagaggcagcggttaacagtttaacaaagcaaggaaaccaaaca
aagagttattcagcgtggtacgatggcagaagggaagtccatatccatccgtcttctata
aacagcaacttcaaagcctttcaataccctttccttgtatttcttgagaaggttgaaacg
cacaaagtatatctgcgtgatacaaccgttgtttctcctttctccattctactttttggc
ggctcgatcaatgttcatcatcagagtggaacagtcaccattgatgggtggttgaagcta
gcagcaccggcacaaactgcggttttgttcaaagagcttcggttaacccttcattctatt
ttcaaagatcttatccggaaaccccagaaatcaggtatagtccacaacgaagtcgtcaaa
tctatggtccatcttcttatagaagaaggcaaacctcaacacacatga
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integrated database retrieval system
