Eutrema salsugineum (saltwater cress): EUTSA_v10023238mg
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Entry
EUTSA_v10023238mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10023238mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10023238mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10023238mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10023238mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EUTSA_v10023238mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
18010302
NCBI-ProteinID:
XP_006392256
UniProt:
V4KI48
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MFGSSNPFGQASNSSPFGTQTQSVFGQTNNASSNPFAPKPFGTSNPFGAQTGSSMFGGTS
TGVFGAPQTSSPFGATSQGFGSSTLAFGASSAPAFGSSSSPFGGTSTFGQKSFGFSAPQS
SPFGSTTQQSQPAFGNNTFGSSTPFGASNTPAFGASNTFGSSTPFGASNTHAFGSSSTPA
FGSSSTPAFGASNTPAFGASNTPAFGASSTPSFGASSSPAFGTSPTPAFRNNAFGASSTP
SFSFGSSPAFGQSTSAFGSGSFASTPSSFGAQGSFLASAQAFGAQQGGSRVMPYVSTTDA
DSASGTQLPGKLKSISAMPVHKNKNHEELRWEDYQRGDKGGQLPAAQSGVITSQPSIFSQ
SSAFGQPSANPTNPFSPAFSQPSANPTNPFSSSVATNSFAQKTPTATTSFSSPFGPSTTP
SMFASTSSTTTSVFGPSPVFSTTTSQPFASSSSPGFGPSPSMVASTPAFSTAGNFNNSQS
SSLFSSTQFRQGGSVFSQPSSGSAQTSFSFGPASSAFAQNTNHAFPQTNNCSTPSTGFAN
QFTISPSLTTSISPFGQPTPPGSTSYQPNQPPQPSSAFSFNNFGQPQTANTNGLPGGMGT
FSQGNSGPATANASVMQPNPVANPFGTLPASPKLSIAQGGHSPSIQYGISSMPVVDKPAP
ARVSPLLTSRHLLQRRVKLPARKYRPGDDGPKVPFFSIEQENSNTPKADAFFIPRENPRA
LFLRPVEKEKSAPPKDGPTPLQENGKSSNGFTNGANHDESKDNGEICDALPVKANQKPNK
TCENHGGDKNVSNSSPSGADIGSLLPKLHHAEYFTQPRIKELAAKERVNPGYCRRVKDFV
VGRHGYGTIKFLGETDVRKLDLEMVVQFSNREVVVYMDESKKPPVGQGLNKPAEVTLLNI
KCIDKKSGKQVKEGPRVDKYKEMLKRKAEEQGAKFVSFDAVNGEWKFRVEHFSSYKPGDV
DDE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcatctaatccttttggacaggcatctaacagcagtccatttgggactcaa
actcaatctgtgtttggtcagaccaataacgcgagtagtaatccctttgctccgaaaccg
tttggtacgtctaatccttttggcgcacagacagggagttccatgtttgggggcacttca
accggtgtgtttggtgctcctcaaacttcctccccttttggtgctacatcacaagggttt
gggagctctactcttgcttttggagcatcttctgctcctgcatttggcagttcgtcttca
ccttttggtggcacttctacttttggacagaagtcttttggcttctcagcgcctcagtca
agtcctttcggaagcacgacacagcaatcacagcctgcatttggaaacaacacttttggc
tcatctacaccttttggtgcctccaacacgcctgcctttggcgcatcaaacacttttggc
tcatctacaccttttggtgcctccaatacgcatgcctttggttcctccagtacgcctgca
tttggttcttccagcacgcctgcctttggcgcatcaaatacgcctgcatttggcgcatca
aacacacctgccttcggtgcatcaagcactccttcattcggcgcttcgagctcacctgca
tttggcacatcacccactcctgcctttagaaacaatgcttttggtgcatcaagcactcca
tcttttagttttggctcttccccagcttttgggcagtctacctcagcatttggcagtggt
tcctttgcttctacgccatcttcctttggagctcaaggttcttttttggctagtgcacag
gcttttggggctcaacaaggaggtagtagggtcatgccttatgtatctacaactgatgca
gactcggccagtggtacccagcttcctgggaaactgaaatcgatatctgccatgcctgta
cacaaaaataaaaaccatgaggagcttaggtgggaggactaccaacgaggagataaaggt
ggacaacttccggctgctcaatctggtgtaataacttctcagccaagtatattctctcag
tcatcagcgtttggtcagccatctgcaaatccaacaaaccccttttcaccagcgtttagt
cagccatctgctaatccaacaaaccccttttcaagctcagtagccacaaactctttcgcc
cagaagactccaacagctaccacaagtttttcgtcaccctttggtccaagcactactcca
tccatgtttgcatcaacttcatcaactaccacatcggtatttggaccatcccctgttttt
tcaacaaccacaagtcagccatttgcttcatcaagctctcctggatttggcccttctcca
tcaatggttgcttcaactccagcatttagcactgctggaaattttaacaacagccagtca
tcttcgctgtttagctcaacccaatttagacagggtggttcagtgtttagtcagcctagc
tctgggtctgcacagactagtttttcatttggaccagctagttctgcgtttgcacagaac
accaatcatgcgttcccccaaactaacaattgtagtacaccttccactggattcgcgaac
cagtttacaatctcgccatccttaactacaagcatctctccttttggtcaaccaacgcct
cctggttcgacctcctaccaaccaaatcaaccacctcagccatcaagtgcttttagtttc
aacaactttggtcaaccccaaacagctaatacaaatgggcttccaggtggaatgggaact
tttagtcaaggcaactctgggcctgcgacggctaacgctagtgttatgcaaccaaaccct
gttgcaaacccatttggaacgcttcctgcttcacctaagctttcaattgctcaaggtgga
cattcaccttcgattcagtatggaatctccagcatgcctgtcgttgataaacctgctcct
gctagagtatcaccactcttgacttctcgacaccttttacagaggcgggtcaagctacct
gcaagaaaataccgtcctggcgatgatggtccaaaggttccatttttcagtatcgaacaa
gagaactcgaatacacctaaggctgatgcgtttttcattccaagggaaaaccctagagcc
ttgtttctacgcccagttgaaaaggaaaaatcagctccgccaaaagatggcccgacacca
ctgcaagagaatggtaagagttcaaatggttttacaaatggagccaaccatgatgagagt
aaggacaacggtgaaatttgtgatgctcttccggtcaaagccaatcagaaaccgaacaag
acatgtgaaaatcatggaggcgacaaaaacgtctcgaacagttcaccaagtggagcagat
attgggtcattgttgccaaagctgcaccacgccgagtatttcacacagcctcggatcaaa
gaattagctgcaaaggaaagggttaacccgggttattgcaggcgggtaaaggacttcgtc
gttggaagacacggttacggtactataaagttcctaggagagactgatgtgcgtaagctg
gacctggaaatggttgttcagttcagtaacagggaagtggttgtgtacatggacgagagc
aaaaaaccaccggttggtcaaggattgaacaagcctgcggaagtgactctgctgaatata
aaatgcatagacaaaaagagcgggaagcaagtgaaggaaggcccgagggtggacaagtat
aaagaaatgctcaagaggaaagctgaggaacaaggagctaagtttgtgtcttttgatgct
gttaatggcgaatggaagtttagagttgagcatttcagttcttacaagcctggtgatgta
gatgacgagtag
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integrated database retrieval system
