Eutrema salsugineum (saltwater cress): EUTSA_v10023432mg
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Entry
EUTSA_v10023432mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10023432mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10023432mg
Spliceosome [BR:
eus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EUTSA_v10023432mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
18009803
NCBI-ProteinID:
XP_006392181
UniProt:
V4KHX9
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MATLEDSFLADLDELSDNEAEMDENDGDVGEEEEDIDMDMADLETLNYDDLDSVSKLQKS
QRYIDIMQKVEEALGKDSDEAEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRDK
YRLKFQELESLVHHPIDYARVVKKIGNETDLTLVDLKGLLPSAIIMTVSVTASTTKGNPL
PEDILQKTMDACDRALDLDSARKKVLDFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS
ALAKMPACNIQLLGHKRKNLAGFSSATSQTRVGYLEQTEIFQSTPPGLRMRASRLLAAKS
ALAARVDSARGDPLGTEGKAFRELIGKKIERWQEPPPARQPKPLPVPDSEPKKRRGGRRL
RKMKERYAVTDMRKLANRMAFGTPEESSLGDGLGEGYGMLGQAGSNRLRVSSVPSKLKLN
AKVAKKLKERQYSGGATTSGLTSSLAFTPVQSCAILRP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgaagattctttcctcgcagaccttgatgagttatccgacaatgaagca
gaaatggatgagaatgatggtgatgttggagaggaggaagaagatattgacatggacatg
gcagacttagaaacccttaactatgatgatctcgatagcgtttctaagctgcagaaatct
cagagatatatcgatataatgcagaaagtggaagaggctctcgggaaggattctgatgaa
gcggagaaaggaacagtactagaagatgatcctgaatacaagctgatcgtggattgcaat
cagctctcagttgacattgagaacgagattgccatcgtccacaactttatccgcgacaag
tacagactcaagtttcaagagcttgaatcgctggtacatcacccaattgattatgcccgt
gttgttaaaaaaattggcaatgagacggacttaacccttgttgatctgaaaggccttctt
ccatctgctattatcatgactgtttcagttactgcttcaacgaccaaagggaacccactg
ccagaagatatccttcaaaagacgatggacgcatgtgatagagctctagatcttgattcc
gcccggaagaaggttcttgactttgttgaaagtaagatgggatctatcgcaccaaatctt
tccgccattgttgggagtgctgttgcagccaagcttatgggaactgctggaggtctgtca
gcacttgctaagatgcctgcctgtaatattcaacttcttgggcacaagaggaagaacctt
gctgggttctctagtgcaacgtcacagacccgtgtgggttatctggagcagacagagatt
ttccaaagcacgcctcctggacttcggatgcgcgctagtaggctcttggctgcaaaatct
gctttggcagcaagagttgattctgctagaggagatccattgggaacagaaggaaaagct
ttcagggagttgatcggtaagaagattgagaggtggcaagaacctcctcctgcaaggcag
cctaagccacttcctgttcctgattctgagcctaagaaaagaagaggtggtcggcgtcta
agaaaaatgaaagaaaggtatgcagtgacagacatgaggaagcttgccaacaggatggcg
tttggtacacctgaagagagttctcttggtgatggattaggtgaaggatatggtatgctt
ggccaggctgggagcaacaggctccgtgtatccagtgttccgagcaagctgaaactcaat
gctaaggtcgcgaaaaagctcaaagaaagacagtattcaggtggtgctactacctcaggg
ttaacatcgagtctggcttttactcctgtgcagagctgtgcaatcctcaggccctag
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