Eutrema salsugineum (saltwater cress): EUTSA_v10023437mg
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Entry
EUTSA_v10023437mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10023437mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10023437mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
EUTSA_v10023437mg
Prokaryotic type
Archaeal type
TFE
EUTSA_v10023437mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-GeneID:
18010133
NCBI-ProteinID:
XP_006392521
UniProt:
V4KIS4
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MEISVPVQKTVVLEPFIKLVKLVARVFYDNYTTVSDNQQKSARSDSRGTAVVVLDALTRR
QWVREEDLAKDLRSNAKQLRKILRYFEEQKLVMRVHRKETAKRAKMYSAAVAATTDGRAE
DKVNFHTHSYCCLDYQQIYDMVRCKLDRIKKKLKDELEDKNTVQEYGCPNCQRKYNALDA
LRLISMEDDSFHCENCNGELVVECNKLTSEEVVDGGDNAKRRQREKLKVLLQNVEDRLGP
LMDQINRVKDLPFPGVESLHAWEARAAMAARANGDLNPNDPSRTQGGYGSTPMPFLGETK
VEVNLGEGKEDVKSEGGDSSQKILPPWMIKEGMKLTEEQRGEMRQEAKVDGVSGGASKLS
DDKKSAMGNGDDKDLKDEYLKAYYAALLKQQEVAEKPTQQESAGVSTSDSLLATTSSDRQ
VGMKSKREEEDEEDVEWEEEAPVAANGDYKVDLNVEANEEEEEEDDVEWEEG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatcagtcccggtgcagaaaaccgttgtgctcgaaccatttatcaagctggtg
aagcttgtagcaagggttttctatgataattatactactgtaagcgataatcagcagaaa
tctgcaagaagtgacagcagaggaactgccgttgtggtgcttgatgcgcttacgagacgg
caatgggttagagaagaagacttagcaaaagacttgaggtcgaacgccaagcaactccga
aaaatattaagatactttgaagaacaaaaattggtcatgcgtgtccacaggaaagagact
gcaaagcgtgcgaagatgtatagtgctgcagtggctgctacaactgatggccgagcagag
gacaaagtgaatttccacacgcactcgtattgctgtcttgattatcaacagatatatgat
atggttcgttgtaagctggaccggattaaaaaaaaactcaaagatgaactagaagataag
aatactgttcaggagtatggctgtcctaactgccaaaggaaatataatgcactggatgcc
ctgagattaatttctatggaagacgattcttttcattgtgaaaactgcaatggtgaactt
gttgtggaatgtaataagctaacctccgaagaagtagtagatggaggtgacaatgcaaag
agacggcagcgggaaaaactcaaagttttgcttcagaatgtagaggatcgactgggacct
ctaatggatcaaataaatagagtaaaagacctaccgtttccgggcgttgaatctcttcat
gcatgggaggctcgtgctgctatggctgcccgtgcaaatggtgatcttaaccctaatgat
ccttcgaggacacagggtggatatggttcaacaccaatgccatttctcggagagacgaag
gttgaggttaaccttggtgaaggaaaagaagatgtcaaatctgaaggtggagattctagt
cagaaaatcttgcctccatggatgatcaaggaaggaatgaagctgaccgaggaacaaaga
ggagagatgagacaggaagcaaaggttgatggtgtctcaggaggagcatcaaaactctca
gatgacaagaagtcagccatgggaaatggcgatgataaagatttgaaggatgagtatctc
aaagcttactacgccgctctattgaagcagcaagaggtagctgaaaagccaactcagcaa
gaatccgcaggcgtatcaacttctgacagtctgttggctactacatcgtcagatcgtcag
gttggtatgaagtccaaacgtgaagaggaagatgaagaggatgttgaatgggaagaagag
gctcctgttgcagcaaatggagactacaaggtggacttgaatgtggaagcaaatgaagaa
gaagaagaagaagacgacgtcgagtgggaagaaggctga
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integrated database retrieval system
