KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10024191mg
Entry
EUTSA_v10024191mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:eus03400]
    EUTSA_v10024191mg
Enzymes [BR:eus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EUTSA_v10024191mg
DNA repair and recombination proteins [BR:eus03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    EUTSA_v10024191mg
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C HHH_5 Helicase_dom4_arc ResIII
Other DBs
NCBI-GeneID: 18029864
NCBI-ProteinID: XP_006412440
UniProt: V4MM54
LinkDB
Position
Unknown
AA seq 1908 aa
MGLRKCTKEPDSSAHLTECHTPGSAVKSCPVGTPKSGSGSSMFSPGDSFWNEAIQVADGL
LIPTENSASVEAKDGGQHGIILSCSNKTDSCSDNLKRSLDLDESRVKDKDAIGYSKVAEK
HGRDFNKEASPLPVKNLELLFQDRKTNGGTRVAPFDQNNITRGSRRISESAFADNKGCGT
LDIAQANKSLIGRMYPEPEGKKVLVCEENHSVRSVSPISNMGKPADSSESEESHTPSSSH
HNKDGLSLSTWLPSEICSVYNKKGISKLYPWQVECLQVDGVLQKRNLVYCASTSAGKSFV
AEVLMLRRVITTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVRSYYGNQGGGTLPKGT
AVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHRGYLLELMLTKLRYAAGEG
SSESSSGESSGNSSGKTDPAHGLQIVGMSATMPNVGAVADWLQAALYQTEFRPVPLEEYI
KVGNTIYNKKMEVVRTIPKAANMGGKDPDHIIELCNEVVQEGNSVLIFCSSRKGCESTAR
HISKLIKKVPIDVDGENSEFVDIRSAIDALRRSPSGVDPILEETLPSGVAYHHAGLTVEE
REIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMIGRDFIDGTRYKQMAGRAGRT
GIDTKGESVLICKQGELKRIMALLNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKD
IHRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEETKLYTTTPLGRGSFGSSLC
PEESLIVLDDLLRARDGLVMASDLHLVYLVTPINVGVEPNWELYYERFMELSPLEQSVGN
RVGVVEPFLMRMAHGATVRSLNRPQDVKKNFRGEYDNRHGSTSTKMLSDEQMLRVCKRFF
VALILSKLVQEASVSEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLGWHDLEGLVAK
FQNRVSFGVRAEIVELTSIPYIKGSRARALYKAGLRTSQAIAEASIPEIVKALFESSAWA
AEGTGQRRIQLGLAKKIKNGARKIVLEKAEEARAAAFSAFKSLGLDVHELINPLPLAPAR
SPNRQETTERDSCEGSVGPSGLQQFPGKLSIEEHMECENFDTDDHREKPREVSGAALGVS
SEVTRLPDFQPIGTTVGIDGPNAVSILSSDTFHLPAYDDGVIKNEDNVEQHLMSNAHIPL
SNKDSTGEKGPITAGNIRGGFDSFLELWESAGEFFFDIHYNKLQDLNSRISYEIHGIAIC
WNSSPVYYVNLNKDLPNLECGEKEKLFKDAVAGKNEVVGTHNMVNVIKSRWNRISKIMGN
ENTRKFTWNLKVQIQVLKSPAISIQRCARLNLAEGIRDFELVDGSWLMMPPLRINHTIDM
SIVTWILWPDEERHSNPNIDKEVKKRLSPEAAEAANRSGRWRNQIRRVAHNGCCRRVAQT
RTLCSALWKILVSEELLEALTTTEMPLVNVLADMELWGIGVDIEGCLRARNILRDKLRSL
EKKAFELAGMTFSLHNPADIANVLYGQLKLPIPENQNKGKNHPSTDKHCLDLLRNEHPVV
PIIKEHRTLAKLLNCTLGSICSLAKLRLSTQRYTLHGHWLQTSTATGRLSIEEPNLQSVE
HEVEFILDKNGNEVNSAAARYKINARDFFVPTQENWLLLTADYSQIELRLMAHFSRDSSL
ITKLSQPEGDVFTMIAAKWTGKAEDSVTPHDRDQTKRLIYGILYGMGANRLAEQLECSSD
EAKEKIRSFKSSFPAVSSWLNETISFCQEKGYIQTLKGRRRFLSKIKFGNAKEKSKAQRQ
AVNSMCQGSAADIIKIAMINIYSAISEDVDTSASSSSTEKKFHMLKGRCRILLQVHDELV
LEVDPSYAKEAAMLLQSSMENAVSLLVPLHVKLKVGKTWGSLEPFQAD
NT seq 5727 nt   +upstreamnt  +downstreamnt
atgggcttgaggaagtgtactaaggaaccagactcatcagctcatctaaccgaatgccac
acgcctggatcagccgttaaatcatgtcctgttggaacccctaagtcaggaagtggtagc
tcaatgttctcacctggcgattctttctggaatgaagcaattcaagtcgctgatggtttg
ttaattccaactgagaactctgcttccgtagaagctaaagatggaggtcaacatggaata
atactttcatgcagcaacaaaacagatagttgcagtgacaacttaaagagaagtttagat
ttagatgaaagcagagtaaaggataaagatgccattggttattcaaaggtcgcggagaag
catggtagagattttaacaaagaagcatctccgctccctgtcaagaatctggaacttttg
tttcaagatagaaaaacaaatggaggtacccgagttgctccatttgaccaaaataacatt
acacgaggaagccgtaggatctctgaatctgcttttgctgataataaaggatgtggaact
cttgatattgctcaggccaataaaagtttgatagggaggatgtatccagaacctgaagga
aagaaagttttagtgtgcgaggagaatcatagtgtaagatctgtttctccgataagcaac
atggggaaaccagctgattctagtgaatctgaagaaagtcatactccttcaagttctcat
cataataaagatggtttaagtcttagcacctggcttccctcagaaatttgcagcgtatac
aataagaaaggaatatctaaactctatccatggcaggtcgagtgccttcaggtagatggt
gttttgcagaaaaggaatctggtatattgtgcttctacaagtgctggtaaaagtttcgtt
gcagaagtcttgatgctgcggcgggtcataacaactggaaaaatggcgttgcttgtgcta
ccttatgtatccatttgcgctgagaaggcagaacaccttgaggtccttcttgaaccactt
gggaagcatgttcgtagttactatggaaatcagggtggtggaacacttcctaaaggcact
gctgtggctgtctgcacaattgagaaggcaaactctttgataaatcgcttgcttgaagag
ggtcgtttgtctgaacttgggataattgttatagatgagctacacatggtgggagaccaa
cataggggttatctgttggaacttatgctgacgaaacttcgttatgctgccggtgaaggc
agttcagagtctagtagtggtgagagttcagggaatagcagtggcaagactgatcctgct
catggcctacaaattgtgggtatgagtgctacaatgcctaatgttggagcagttgctgac
tggcttcaagcagctttatatcagacagagtttcgaccagttccgctagaggagtatatt
aaagttggtaacaccatttataataaaaagatggaagtggtgaggactataccaaaagct
gctaatatgggaggaaaagacccagaccatatcattgagctttgtaacgaggtagttcaa
gagggcaattcagtgctgatattttgctcgagtcggaaaggatgcgagtcaactgctagg
catatttcaaagctcattaaaaaagtgcccatagacgttgatggtgaaaatagtgagttt
gtggatatcagatctgctattgatgccctgcgaaggtctccgtctggagtagatcctatc
ctagaagaaactctgccctctggggttgcctaccaccatgctggtcttacagtagaagaa
agagagatagttgagacctgttaccgtaagggtcttgtacgtgtattaacagctacatcc
actctggcagcgggggtcaacctgcctgcaaggagagtcatatttcggcaaccaatgatt
ggccgtgattttattgatggaacgaggtacaagcaaatggctggtcgagctgggcggact
gggattgatacaaaaggagaaagtgtgttgatttgcaaacaaggagaactcaagcgaata
atggcacttctaaatgaaagctgcccaccgttacagtcttgtttatctgaggacaagaat
ggaatgactcatgcaatattagaagttgtggcaggtggaattgttcagactgccaaagat
atacatcgctatgttaggtgtactcttctgaattctacaaagccctttcaagatgtggtc
aaatcagctcaggattctcttcggtggctgtgccacagaaaatttcttgagtggaatgaa
gagacaaagttatacactacaacaccccttggacgtggatcgtttggcagttcactctgc
ccagaggagtcacttattgtgctggatgatcttctacgagcacgtgacggactagttatg
gcttctgatttgcatttggtgtacttagtcacaccaattaatgttggtgttgaaccaaac
tgggaattgtattatgaacggtttatggaactatctcctttagaacagtctgtaggcaat
agagttggagtggtcgaaccttttcttatgcgcatggcacatggtgcaacagtacgcagt
ctaaacagaccacaagatgtaaaaaaaaatttccgtggagaatatgacaatcggcatggt
tcaacgagcactaagatgctttcagatgaacagatgcttcgagtgtgcaaacggtttttt
gttgctctcatcttgtcaaaattagttcaggaagcttctgtgtctgaggtctgtgaagcc
tttaaagtggctagaggtatggttcaagcgctacaggagaacgctggaaggttttcttcc
atggtttcggtgttttgtgagaggcttggatggcatgatctggaaggcttagttgcaaag
tttcagaaccgtgtttcatttggtgtcagggctgaaattgttgaacttactagcattcca
tatataaagggttcaagagctagagcgttgtacaaagctggcttgcgtacatctcaggca
atagctgaagcatccatccctgaaattgtcaaagctctctttgaatcttcagcgtgggct
gcagaaggtacaggacaaagaaggatccagttgggactagccaagaaaatcaagaatggg
gcgcgaaaaattgttcttgagaaagcagaagaggcgagggctgctgcgttctctgctttt
aagtcacttggtttggatgttcatgagcttataaatcccttgccgttagcccctgctagg
agtcccaatagacaagaaactactgaaagagacagttgtgaagggtctgttggtcccagt
ggattacaacaatttccaggaaaattaagcatagaggagcacatggaatgtgaaaacttt
gatacggatgaccacagagaaaagccaagggaagtgtcaggtgctgccctaggggtttca
tcagaagttactcgtcttcctgattttcaacccataggaactacagtcggcattgatggg
cctaatgctgtcagtattctttccagtgatactttccatctccctgcttatgatgacgga
gtgataaaaaatgaggacaatgttgagcagcatttgatgagtaatgcccatattcctctt
agtaataaggatagtacaggtgaaaagggtccaataactgcaggaaatattcgtggtgga
tttgattctttcctggaactttgggaatctgctggggagtttttctttgatatccactat
aataaactacaggatttgaattcccgcatctcttatgagatacatggaattgcgatctgc
tggaatagctctcctgtgtactatgttaatcttaacaaggatcttcccaacctggaatgt
ggagaaaaagaaaagcttttcaaggatgcagttgctggcaagaacgaggttgtgggtacc
cacaacatggtcaatgttataaaatctaggtggaacagaatcagtaaaataatggggaat
gaaaacacaagaaagttcacttggaatttgaaagtccagattcaggtgctcaagagtcct
gccatttcaatccaaagatgcgctcgcctgaatcttgcagaagggatcagagattttgag
ttggtggatggatcttggttaatgatgcctccgcttcgtataaatcacaccattgacatg
agcatcgtgacatggattctttggccagatgaggaaagacattcaaatccaaacatagat
aaggaagtaaagaaaagactgtccccagaggcagctgaagctgctaatcgcagtggcaga
tggaggaatcagatccgaagggttgcccacaatggttgctgcagacgggttgctcaaaca
cgtaccctttgttcagctctttggaagatcctcgtttccgaagaacttctcgaagcactg
acaaccactgaaatgccgctggttaatgtccttgcagacatggagctctggggtataggc
gtcgatatagaaggatgcctgagggcacggaatatactgcgggataaactgcggtctctg
gagaagaaagcatttgaattggctggcatgactttttcattgcacaacccagctgatatt
gcaaatgtgctctatggacagttgaagttgcccataccggaaaaccaaaataaagggaaa
aatcatccaagtactgataagcattgcttggatcttttaaggaatgagcatcctgttgtc
ccaattatcaaagagcaccgcactttggcaaagctcttaaattgtacacttgggtcaata
tgttcgcttgctaagctacgcttgagcacacaaaggtacactttgcatggccactggctt
caaacatcaacagcaacggggaggctttccatagaagagcctaatctccaatctgttgag
catgaagtagagttcatattggataaaaatggaaacgaagtaaattcagctgctgctcgt
tacaaaattaatgcacgtgatttctttgttcctactcaggaaaattggttactcttgaca
gcagattattcacagatagagttgcgactcatggcacacttttctagagattcctcgttg
attacaaagcttagtcagcctgaaggtgatgtctttacgatgatagctgcaaaatggact
ggaaaggccgaggattcagttactccacatgatagagatcagaccaaaagattgatctat
ggaattctttatggaatgggtgcaaacaggcttgcagaacagcttgagtgcagctcagat
gaagccaaggagaaaataagaagctttaaaagttctttccctgcagtcagttcttggctt
aacgaaacgatttcattttgtcaggaaaaaggatacattcagactctcaagggaagaagg
cggttcttgtcgaaaattaaatttgggaatgccaaagagaaatctaaggctcaaaggcaa
gctgtaaattccatgtgccagggatctgctgctgatataatcaagattgcgatgataaac
atatattctgcaatttctgaggatgttgatacttcagcatctagttcttcaacggaaaag
aagtttcacatgttgaagggacgatgccgaattcttctacaggtacatgatgaacttgtg
ctggaagttgatccttcttatgcaaaagaggctgcaatgttgctacaatccagcatggaa
aatgcggtttcacttctcgtacctcttcatgtgaaactgaaggtagggaaaacatggggt
tctttagagccatttcaggctgattaa

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