Eutrema salsugineum (saltwater cress): EUTSA_v10024192mg
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Entry
EUTSA_v10024192mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10024192mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10024192mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
EUTSA_v10024192mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
HECT type E3
EUTSA_v10024192mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
ARM_ARMC5
HEAT_EZ
HEAT_2
K_channel_TID
TFIIA
PSP
Motif
Other DBs
NCBI-GeneID:
18028375
NCBI-ProteinID:
XP_006411652
UniProt:
V4LRA0
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
METRSRKRAEATSTAPSSSSSSPPPSGPTTRSKRARLSSSSSSSVTTRSRSSRSVATASA
APAPMDTSTESSGLRRGGRGNRGNNDNTNSDKGKEKEHDVRIRDRERERDRAREQLNIDA
AAAAAAAADDDDDNDSEDGNGGFMHPNMSSASSALQGLLRKLGAGLDDLLPSSGIGSASS
SHLNGRMKKILSGLRSDGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNH
ESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQSLQALKKI
SQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDYVMEAVPLLTN
LLQYHDSKVLEYASICLTRIAESFASYPEKLDELCNHGLVTQAASLISTSNSGGGQVSLG
VSTYTGLIRLLSICASGSPLGFRTLLLLGISSILKDILLGSGVSANASVSPALSRPADQI
FEIVNLANELLPPLPEGVISLPTGTNTLVKGSGQKKSSPSTSGKQEDALKVSPREKLLGD
QPELLQQFGLDLLPVLVQIYGSSVNGTIRHKCLSVIGKLMYFSTSDMIQSLIGDTNISSF
LAGVLAWKDPQVLVPALQVAEILMEKLPETFSKVFVREGVVHAVDQLVLVGKPISHASPT
DKENDCVPGSARSRRYRRRSSNPSSDGNQSEELKNSASVNIGANHNSVDTPTASFMLRET
VSSCAKAFKDKHFPSDGGDLDVGVTDDLLHLKNLCAKLTGSIDDHKVKGKGKSKASGPCL
GDFSASKEEYLTGVISEILGELSKGDGVSTFEFIGSGVVAALLNYFSCGYFSKEKISDFN
LPKLRLEGLRRFKAFLEVALPSDGNEGKIPPMTVLIQKLQDALSSLERFPVVLSHPSRSL
SGSARLSSGLSALAHPLKLRLCRAPGEKTLRDYSSNIVLIDPLASIAAVEDFLWPRVQRS
DSATKTAAPAGNTEPGTVPSGAGVSSPSSSTPASTTRRHSSRSRSAINIGDTSKKEPVHE
KGSSSSKGKGKGVMKPAQADKGPQTRSSAQRRAVLDKDTQMKPASGDSSSEDEELEISPV
DIDDALVIEEDDISDEEDDDNEDVLDDSLPMCTPDKVHDVKLGDAVDDDGAGLATSGRQM
NPALGGTSGAAAARGSDSTDAGIGNSYGSRGALSFAAAAMAGLGAASGRGIRGSRDLHGR
TLHRSSDEPSKLIFTTGGKQLSRHLTIYQAVQRQLMLDDDDDDRFGGSDFISSDGSRVND
IYTIMYQRPDSQANRLSVGGASSTTPSKSTKSATSNSSLESQSCRASLLDSILQGELPCD
LEKSNSTYNVLALLRVLEGLNQLGPRLRAQTVSDRFVEGKITSLDDLNTAVAKVSHEEFI
NSKLTPKLARQIQDALALCSGSLPPWCYQLTRACPFLFPFQTRRQYFYSTAFGLSRALNR
LQQQQGADGSGSTNEREMRIGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGE
VGTGLGPTLEFYTLLSHDLQKVALGMWRSNSGDKVSMQIDRDEIEDGKSSAARDGDIVQA
PLGLFPRPWPSTADVSEGSRFHKVIEYFRLLGRVMAKALQDGRLLDVPLSTAFYKLILGQ
ELDLHDIMLFDAELGKTLQEFRVLVGRKHYLEAIGGDNCSAISDLSLRGSRIEDLCLDFT
LPGYPEYILRSGDEIVDMNSLEEYISLVVDATVKRGVARQIEAFRSGFNQVFDITSLQIF
TPSELDYLLCGRRELWEAETLAEHIKFDHGYTAKSPTIINLLEIMGELTADQQRAFCQFV
TGAPRLPPGGLAVLNPKLTIVRKHSSTSSAAANGTGASETADDDLPSVMTCANYLKLPPY
STKEIMYKKLLYAINEGQGSFDLS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcggagccgcaagcgtgcggaggcgacctcaactgccccatcttcttcttct
tcctcacctcctccctcaggtcccaccacccgcagcaaacgcgcccgcctttcgtcttcc
tcttcctcctctgtcaccacccgctctcgttcttctcgctccgtcgctactgcttctgct
gctcccgctcccatggacacctccaccgagtcttctggtcttcgccgaggcggacgaggt
aataggggaaacaacgacaacactaattctgacaagggtaaggagaaggagcatgatgtt
aggattcgggacagagaaagagaaagagaccgtgccagagaacagctcaacatcgatgct
gctgccgctgccgccgccgccgccgacgacgatgacgacaatgacagtgaggatggcaac
ggcggattcatgcatcctaacatgagctccgccagcagtgctttacaaggtctactgagg
aagcttggagctggattggatgacttgcttccttcctccggtatcggctctgcttcttct
tcccacttaaatgggaggatgaagaagatactctctggcttgcgctccgatggtgaagag
ggcaagcaggtcgaggctttaacccagctctgcgagatgttatccattgggaccgaagac
tccttaagcaccttctctgttgattccttcgtccctgttctcgttggtctactaaaccat
gaaagcaatcccgacattatgcttcttgcagccagggctcttacccatctatgtgatgtc
ttgccgtcttcttgtgctgccgttgtacattacggtgctgtttcatgctttgtcgccaga
ttgctaaccattgaatacatggacttggccgagcagtctctgcaagctcttaaaaagata
tctcaggagcacccaactgcttgtttgcgagctggcgctcttatggcagtgctctcatat
ctggatttcttctccactggcgtccagcgtgtagctctatctactgctgcaaatatgtgc
aagaaattaccttcagatgcatctgattatgtcatggaagctgtaccattactgacgaac
ctacttcagtatcatgattcgaaggttttggaatatgcttctatatgtctgactcggatt
gctgaatcatttgcatcataccctgagaaattagatgaattatgcaaccatggcctggtg
actcaagctgcgtctcttatatccactagtaattcaggaggtggacaagtatctctcggg
gtttcaacatacacggggttaatccgattactttccatctgtgcaagcgggtcacctctt
ggattcaggacattacttcttctcggtattagtagcattcttaaggatattctgttgggt
tctggtgtctctgctaatgcatctgtatccccagcactgagcaggcctgcagatcagatt
tttgagatagtcaacctagcgaatgagcttctccctccgttgccagaaggagttatctcc
cttcctactggcacaaacactttggtgaaaggttcaggtcaaaagaaatcttctccaagt
acttcaggaaaacaagaagatgctctaaaagtctcacctagagaaaaattacttggtgat
caacctgaacttctgcagcaatttggattagatcttcttccagttttagtgcagatttat
ggttctagtgtgaatggtactattcgccacaaatgtctctcagttatcggaaagttgatg
tatttcagcacttcagatatgattcaatctctaattggtgacacaaatatatcgagcttc
ttggctggtgttttggcatggaaagatccacaagtcttggttcctgctctacaagttgca
gaaattctgatggaaaagcttcctgaaacattctcgaaagtgtttgtgagggaaggggtg
gttcatgctgtagatcaacttgtcttggttggtaaacctatttctcatgcttcacctact
gataaggaaaatgactgtgtgcctggatctgcacgatctaggcgttatagacggcgaagt
agtaatcccagttctgatggaaatcagtcggaagagctcaagaattctgcgtccgttaac
ataggtgcaaaccataattccgtggatactcctacagctagcttcatgttaagggaaaca
gttagctcctgtgccaaagcattcaaagacaagcacttcccgtctgatggtggggatctt
gatgttggagttactgatgatctcttgcatctgaagaatctttgcgcgaagctaactggt
agtatagatgatcataaagtgaaaggaaaaggaaaatctaaagcctctgggccatgcctt
ggagatttttctgctagcaaggaagagtacttgactggtgtcatttctgagatacttggc
gagctaagcaaaggggacggtgtctcaacttttgagtttattggcagtggtgtggttgca
gcattgcttaactatttttcttgtggatacttttccaaagagaagatctccgacttcaat
ttgcctaaacttcgcctggaggggctaagaaggttcaaagcttttctagaagtcgcactt
ccttctgatggtaatgagggaaagatccctcctatgacagttttgattcagaaacttcaa
gatgctttatcttcactggaacgctttcccgtcgtccttagccatccctcaaggtcacta
agtggaagtgctcgtctttcatctggattgagtgctttggcacatcctttaaagttgcga
ttatgccgtgcacctggagagaagacactacgtgattactcctccaatattgttcttata
gatccattggcaagcatagcagcagtagaggactttctctggccccgagttcaacgcagt
gactctgctacgaagacagcagcgcctgctggaaatacagagccaggcacggtacctagc
ggtgctggtgtttcatcaccatcctcgtcaactccagcctccaccactcgtcgtcattct
tctagatctagatcagcaattaacataggtgatacctcaaagaaagaacctgtgcatgag
aaaggttccagctcatcgaaaggtaaaggtaaaggtgttatgaagcccgctcaggcggat
aaggggcctcaaacaaggagcagtgctcaaaggagagctgttcttgacaaagatacacaa
atgaaaccagctagcggagactccagctctgaggatgaggaattggaaatatcccctgtc
gacattgatgatgccttggtgattgaagaggatgacatttctgatgaagaagatgatgat
aatgaagatgtgttggatgacagtcttcccatgtgcacacctgataaagtgcatgatgta
aaattgggagacgcagtggatgatgacggtgctggtctggcaactagcggccgacagatg
aatccagctttgggaggcactagtggagctgcagcagcacggggatctgattctactgat
gctggcattgggaattcttacggttctaggggtgcactctcctttgctgctgcggcgatg
gctgggcttggagctgccagtggtagaggtatcaggggaagtagagatctgcatgggcgt
accctacatcgaagttccgatgagccctctaagttgatatttactacaggaggaaagcaa
cttagtagacatttgacgatttatcaggctgtgcagcgacaacttatgctagatgatgat
gatgatgacaggttcggtggcagcgatttcatctcaagtgatggaagcagagtcaatgat
atttacaccatcatgtaccagaggccggatagccaagcaaataggttgtctgttggtgga
gcaagttctaccacaccatcaaaatccactaaatcggctacgagcaattctagcctagaa
tctcagtcatgtagggcatctcttttggatagtatcttacaaggggagcttccgtgcgac
cttgagaagtcaaactctacatataatgttctggcgctcttgcgtgttttagagggttta
aatcagcttggccctcggttaagagcccaaactgtttctgatcgtttcgtagagggtaaa
attactagtctagatgatctgaatacagctgttgctaaggtttctcatgaagaattcatc
aatagcaaacttacacccaaactagctcgacagatccaggatgcgcttgctttgtgtagt
ggaagtctccccccttggtgctaccagttaactagagcatgcccttttttgtttccgttt
cagacccgtagacagtatttttattcaactgcttttgggttatcccgtgcattgaatcgc
ttgcagcagcaacaaggtgctgacggcagtgggtctaccaatgaacgagagatgagaata
gggagattgcagcgccagaaagtccgtgtatcccgaaatagaatattagattctgcagcg
aaagttatggagatgtattctagccaaaaagctgtgcttgaagtagaatattttggtgaa
gttggtactggtctaggacctacacttgagttttacacactcctaagccatgatctacaa
aaggttgcacttgggatgtggagatcaaattctggcgacaaggtatcaatgcaaattgat
agagatgagattgaagacgggaaatcatctgcagctagggacggagatatagttcaggca
ccacttgggttgtttcctcgaccttggccctcaacagctgacgtatctgaaggtagtcgt
tttcataaagtcattgaatatttccggctcttggggcgtgtgatggcaaaagcacttcaa
gatggacggctattggacgtcccattgagtacagcgttttataagcttattcttggtcaa
gagcttgatttgcacgatattatgttatttgatgctgaactcggcaagactttgcaagag
tttcgtgttcttgttggccgcaagcactatctggaggcaataggtggtgacaattgcagc
gcgatttctgatttaagtttacgtggatctcgtatagaagatctatgcttggacttcacg
ctacctggctatcctgaatacattctgagatcaggagatgaaattgttgatatgaatagt
cttgaggagtatatatccctggtcgttgatgctactgtcaagagaggagttgcccggcag
attgaagcctttagatctggatttaatcaggtgtttgacataacatctctacaaatattc
accccttctgagctggactacttgctatgtggtcgtagagagttgtgggaggcggagact
ctagctgaacatattaagtttgatcacggttatactgccaaaagtccgacaatcattaat
ttactggagatcatgggagagcttacagcggatcaacagcgggctttctgtcaatttgta
actggagctcctaggcttcctccgggtggtctagctgttctgaacccaaagctgacgatt
gtcagaaagcactcatcaacctcaagtgcggcagccaacggaacaggggcttcggagacg
gcagacgatgatcttcccagtgtaatgacttgcgccaactatcttaagctccctccttat
tctacaaaggaaatcatgtacaagaaacttctctacgccatcaacgaagggcaaggatcg
ttcgacctgtcataa
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integrated database retrieval system
