Eutrema salsugineum (saltwater cress): EUTSA_v10024196mg
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Entry
EUTSA_v10024196mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03255
protein TIF31
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
eus03012
]
EUTSA_v10024196mg
Translation factors [BR:
eus03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
EUTSA_v10024196mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
CLU
TPR_9
TPR_MalT
TPR_8
Motif
Other DBs
NCBI-GeneID:
18028841
NCBI-ProteinID:
XP_006412996
UniProt:
V4MDB0
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MAPKAGKTKPHKSKGEKKKKEEKVLPTVIEISVETPDESQVTLKGISTDRILDVRKLLAV
HVQTCHLTNFSLSHQVRGTRLKDSVDIVSLKPCHLTIVEEDYTEELATAHIRRLLDIVAC
TTAFGSSKPPVSRASTKDSVPKESGSNEGDSPADKDAGDSGSGLSPKLKESEKKLVGNCE
SQAAEGGDKGDINMCPPTRLGQFYEFFSFSHLTPPIQYIRRSVRPSIEDKGLDDLFQIDI
KVSSGKPITVVASRTGFFPAGKKQLLCHSLVELLQQISRPFDAAYDALMKGFIEHNKFGN
LPYGFRANTWVAPPVVADSPSTFPSLPVEDETWGGNGGGVARSCKHDQREWAKEFAILAA
MPCKTPEERQVRDRKVFLLHSLFVDVSVFKAVELIKNVVESNQRSPKDPAAFAFHEERVG
DLIIKVARDEPDASAKVDRKSDGTRVLDISQEELDQRNLLKGITADESATVHDTSTLAVV
VVRHCGFTAIVKVAAEFKLDGGRILEDIEIEDQSEGGANALNVNSLRTLLHKSSTPSSIA
QRSPNADSEQIRVAKSLVRKVFEDSLQKLEAEPPRNTKPIKWELGACWVQHLQNQASSKS
ETKKTEDAKPEPTVKGLGKQGALLKEIKRKIDVKAHKAEQGKDALANTVDNDNKSEAADQ
KELEKQNEEMEKMWKELVTEAAYQRLKESETGFHLKSPRELIEMARKYYADTALPKLVAD
FGSLELSPVDGRTLTDFMHTKGLQMHSLGRVVELAEKLPHVQSLCIHEMIVRAYKHILQA
VVAAVENTADLATSIASCLNVLLGTPSDTESEYDEKIKWTWVETFISKRFGWNWKHEGSQ
ELRKFAILRGLSHKVGLELVPKDYEMDSSYPFKKLDIISMVPVYKHVALSSIDGRTLLES
SKTSLDKGKLEDAVNFGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQ
KALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTA
ATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSL
SVQHEQTTLQILQAKLGQDDLRTQDATAWLEYFESKALEQQEAARNGTPKPDASISSKGH
LSVSDLLDYITPDTGLKARDAQRKARLKVKGRPGQNPGPVSEENQKDDKILTPTDIIVES
SSDKENKSEAKSEEIKVEKRDLEPQDQLTLVKLESTAKEDDDSDEGWQEAVPKNRYPSGR
RTRPSLAKLNTNFMNVTQQTSKSRGKSTNFASPRTSSNELSISAAGSTSQHAKKLLKSPS
LNRKQNSSNIVGERPVNEKSALANPACTEQINKPTPMLSPVSVKAGKLFSYKEVALAPPG
TIVKIVSEQLPEETTALETLDAAKVAVDDPEKVKAEDVESGSNQVATETEAKNAGSDEQG
EVLVGGTELMSSPGEINNVEAEKAAAEAFPAETAVSDAKQGKFGRVQTAEESNRGLLNKS
PTTEDTNGNGPATGVKLQKDVSDAELKAVDGQTEDSPKSSVAADGEKQDASDAQKEMSKK
LSASAPPYTPTTIPIFGSITVPGFKDHVGILPSPLNMPPMLPVNHVRRSTPHQSVTARVP
YGPRLSGGGYNRSGNRVPRNKPSFPSSTESNGEANQVNGPRIMNPHAAEFIPSQPWVSNG
YPVSPNGYLASPNGAEITQNGYPLSPVAGGYPCNIPAQPQNGLVIPTPLALEELPDTESS
EEKTGSEEESNSEKKVAEGEEAIAQETTETLENGHSTVGVGEEKPTAHEISDKKNGEGLG
GKCWGDYSDNEIEVTS
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggctcctaaagctgggaaaacaaagccacacaagagtaaaggagagaagaagaagaag
gaagagaaagttttgcccactgtcattgagataagtgtagaaacaccagatgaatcccaa
gtgactctcaagggaatctctacggacagaatcttagatgtgaggaagctcttggcggtc
catgttcagacatgccacctcaccaacttctctctctctcaccaggtgcgtggcactaga
ctcaaggattccgttgacatcgtatcgctcaagccttgccacctcaccatcgtcgaagag
gactatactgaggagctagccaccgcgcacatacggcggctccttgacatcgtcgcttgc
accaccgccttcggttcgtcgaaacctccggtgtctcgcgcgtccaccaaagactctgta
ccgaaggagtcaggttcgaatgagggagattctccggccgacaaggatgccggcgattca
ggttccggtctcagccctaagcttaaggaatcagagaagaaactcgtcgggaactgtgag
tctcaggcggcggaaggtggggataagggtgacatcaacatgtgcccaccgactcgtctc
gggcagttttacgagtttttctccttctcacaccttactcctccgatccaatatatcaga
aggtctgttcgtccatctatcgaggataaaggattagatgatttgtttcaaatcgatatt
aaagtttcaagtgggaagccgatcacggtcgttgcctcaagaacaggttttttcccagct
gggaaaaagcagcttctgtgtcattccttggttgagctgctgcaacagataagccggcca
tttgatgcggcttatgacgctcttatgaaaggtttcattgagcacaataaatttggcaac
cttccttatggtttccgagcaaacacctgggtagctcctccggttgttgctgatagccca
tctacctttccgtcacttccagtggaggatgagacatggggagggaatggcggcggggtg
gcccggtcttgtaagcatgaccaaagagagtgggcaaaggaatttgcgattttggcagcg
atgccttgtaaaacacctgaagagagacaggttcgagataggaaggtcttcctactccac
agtctatttgtcgacgtttctgttttcaaggcagtggaattaataaagaatgtcgtagag
agcaatcaacgctcaccaaaggatcctgctgcatttgctttccatgaagaaagagttggt
gatttgatcataaaggtggctagagatgagcctgatgcaagtgccaaggttgaccgaaag
agtgatgggactcgggttctagatatctctcaggaagaacttgatcaaaggaatttgctt
aaagggatcactgctgatgagagtgcgacggttcatgatacgtctaccttggcggtggtg
gttgtcagacattgtggtttcacagccattgtaaaggttgctgctgaatttaagttggat
gggggccgaatcctagaggatattgaaatcgaagaccaatcagaaggaggtgcaaatgca
ctgaatgtaaatagcttgaggactctattgcacaagtcgtcaacgccttctagcatagct
cagagatcaccaaatgcagactcagaacaaatacgtgttgccaagtcccttgtgaggaaa
gtatttgaggacagtctgcagaaattggaggctgaacccccaagaaataccaagcctata
aagtgggaattaggagcttgttgggtgcaacatctgcaaaatcaagcttcaagtaaaagt
gagactaagaaaactgaagatgctaagcctgaaccaactgtgaagggtcttggaaagcaa
ggtgcacttcttaaggagataaaaaggaagattgatgtgaaagctcacaaggctgaacag
ggcaaggatgcccttgctaatactgttgacaatgacaataaatcagaagctgcggatcag
aaggaactcgagaaacaaaatgaggaaatggaaaagatgtggaaagaactggtgacggaa
gctgcatatcagcgccttaaagaatcagaaactggttttcatctcaagtcacccagagag
ctgattgaaatggcccgcaaatactacgctgacactgctcttccgaaactggtggcagac
tttggatcccttgaactctcacctgtcgatgggagaactctgacagactttatgcacacc
aaaggcttacaaatgcattccttggggagagtggtcgagctggctgaaaaactccctcat
gtgcaatccctctgtattcatgaaatgatagttcgggcatacaagcatatactgcaggct
gttgtagcagctgttgaaaacactgctgatctggctacctcaatagcatcatgcttaaat
gtcctattgggaacaccgtctgacactgagagtgaatatgatgaaaagataaagtggact
tgggtagaaacgttcatttccaagaggtttgggtggaattggaagcatgaaggcagccaa
gaactgagaaaattcgccattcttagaggactgtcacacaaggttggactggagcttgtt
cccaaagactatgagatggacagctcatatccgtttaagaagttagatattatcagtatg
gttcctgtgtataagcacgtagcattgtcatccattgatggacgcactttgttggaatcg
tccaaaacttccttagataaaggcaaactagaggatgctgtcaattttggcaccaaggca
ttggcgaagcttgtagcagtgtgcggcccatatcatagaatgaccgccggagcatatagt
cttcttgctgttgtgctgtaccatactggggactttaatcaggctaccatttatcagcag
aaagcactcgacataaatgaaagggaacttggccttgatcacccagacacaatgaaaagc
tacggcgatctggctgtcttctattatcgtcttcagcacacagagttagcgttgaagtat
gtcaaccgtgcattgtaccttctgcatctaacatgtggaccgtcacatccaaatacggct
gccacttatattaatgtagcgatgatggaagaaggtttggggaatgttcatgtggcttta
agataccttcatgaagcgttgaaatgtaaccagagactacttggagctgatcatatccag
actgctgcaagctaccatgccattgctattgctctttctttgatggaagcatactccttg
agcgtccagcatgagcagaccactctacagattctacaagcaaaactaggccaggacgat
cttcggacacaggatgcgactgcgtggcttgagtattttgagtctaaagctctggaacag
caagaagctgcacgaaatggtactcccaagccagacgcctctatttccagcaaaggccat
ctcagtgtatcagacctgctagattatataaccccggatactggtcttaaagcaagggac
gcccaaaggaaagctcgcctgaaggtcaagggaagaccaggacaaaatccaggacctgtg
tcagaagaaaatcagaaagatgataaaattctgacgccgactgatattattgtggagagt
tcaagtgacaaagagaacaaatccgaagcaaaatctgaagaaataaaggttgagaagcgt
gatttggaacctcaagatcaactgacgctagttaagctcgagtccacggccaaagaggat
gatgactctgacgaaggatggcaagaagctgtcccgaaaaatcgttatccctccgggcgt
agaacccgtcccagcctggcaaagctgaacacaaacttcatgaacgtgacccagcagaca
tcaaaaagcagaggaaaatccaccaatttcgcatccccaaggactagttcaaatgaactt
tcaatttctgccgctggttctacatcacagcacgcgaagaagcttttaaagagcccgagt
ttaaacagaaagcaaaacagctccaatatagtgggagaaagaccagtcaacgaaaaatca
gccctggcaaacccagcttgcactgaacagatcaacaagccaactccgatgctgagtccc
gtgagtgtcaaagctggaaaactgttttcctataaggaggttgcactggcaccccctgga
acgattgtgaaaatagtttcagagcagttgccagaagaaacgactgccttagagactttg
gatgcggcaaaagtcgcagtagatgatcctgaaaaggtgaaggctgaggatgttgagagt
gggagtaatcaagtggctacagaaacggaagcgaaaaatgctggtagcgatgaacaagga
gaggtgcttgttggtggaacggagttgatgagttcaccaggagaaatcaacaatgtggaa
gccgaaaaggcagcagcagaagcatttccagcggagacagctgtatcagatgcaaaacag
ggaaaatttgggagagtacaaacggctgaggaatcaaatagaggtctactgaataagtca
ccaacaacagaagatacaaatggaaatggaccagcaaccggagtgaagctacagaaggat
gtctccgatgctgaactgaaagcagtagatggccaaacagaagatagcccaaagtcatca
gtagctgcagatggagaaaaacaagacgcatccgatgcacaaaaagagatgagcaagaag
ctctctgcttctgcaccaccttataccccgacgaccattccaatttttgggtctattaca
gttccgggattcaaagaccatgtgggaatccttccctccccattgaatatgccaccaatg
cttcctgtaaaccatgtacgcaggtcaactcctcatcaatctgtaacagctcgagttccc
tatgggcctaggctctcaggtggtggttacaaccgatctggaaacagggttccgcgtaac
aagccaagcttccccagtagcactgagtccaatggtgaggctaatcaagtcaatggccca
agaataatgaaccctcatgctgctgagttcataccaagtcaaccttgggtttctaatggt
tatccagtttcgccaaacggctatttggcatctcccaatggggcggaaataacacagaat
gggtaccctctgtcaccagtagcaggtggatatccgtgtaacatacctgcacagcctcag
aatgggcttgttatacctacaccactggctttggaggaattacctgatactgaaagctct
gaggagaagactggaagcgaagaggagagcaatagcgaaaagaaagttgcagagggtgaa
gaagccattgcacaagaaactacagagactcttgaaaatggacactcgacagtaggtgta
ggtgaagaaaaacccacagcacatgagatatctgacaagaaaaatggggaaggacttgga
ggcaagtgctggggagattacagcgacaatgaaattgaagtcacaagttga
DBGET
integrated database retrieval system
