Eutrema salsugineum (saltwater cress): EUTSA_v10024231mg
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Entry
EUTSA_v10024231mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10024231mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10024231mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
EUTSA_v10024231mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
18029436
NCBI-ProteinID:
XP_006414244
UniProt:
V4MJU2
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MKRKHYYELNHSFDPCPFEVFCSGTWKAVEYLRIENGVMAMQLLENGHVLEDVRPFQRLR
LRSRKATSIDCNSFLRHGVDVCVLYHKSVSLDEETPEHDMEPVWVDAKIVSIERKPHESE
CLCNFYVSIYIDQGCIGSEKHRINRASVLVGLNQISVLQKFFKEQSMDRFYRWRFSEDCA
SLVETRLTHGKFLPDLTWLFVTSVLKSIVFHIRTIQEKMVYQIVTDQDSQGSSSSLSAMN
ITVEDGVYISKVVLFNPDGDDGTHQDPDVQQESEEEVMELRRSKRRHVRPDRFAFSESQL
DSKDGWVRMMPYRYSTWSVFSDDDEEDCEDDDDDDDDYDDGDTDDDLYIPLSHLFGKKGS
AKGFSKSKQREIVLEDKTERKKKMKMKKREGFGRNSELSVIPFTPVLEPIPLEQFGLNAN
SLCGGVSGSNLMDEIDKYRSKAAKYGKKKMSEMDEMESDLCWKDNLRKSFQKLKGPHSRR
RSVSGKTGNSDEPQIYTKRTLSAGAYNKLIDSYMSNIDSTIAAKNEATSVVEQWEELKNF
TSTSMEAEDMCSEDDDDDDDDGETSENEMLWREMELCLASSYILDDSEVRVDNEAFQKAT
GDCKHDFELNEEIGMCCRLCGHVGTEIKHFSAPFAQHKKWTTETKQINEDDIDTKVKQDE
VESRNFTMTVVAASSETPSAEESDNVWSLIPQLKRKLHMHQRKAFEFLWRNLAGSVVPAM
MDPSSEKIGGCVVSHTPGAGKTFLIIAFLASYLKIFPGKRPLVLAPKTTLYTWYKEFIKW
EIPVPVHLIHGRRTYCVVKENTIQFKGVPKPSQDVRHVIDCLDKIQKWHAQPSVLVMGYT
SFLTLMREDSKFAHRKHMAKVLRESPGLVILDEGHNPRSTKSRLRKALMKVDTDLRILLS
GTLFQNNFCEYFNTLCLARPKFVHEVLMELDQKFNTNQAVQKAPHLLENRARKLFLDIIA
RKIDTKVGDERLQGLNMLKNMTSSFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDLQHKTL
TKLQNIMSTYHGYPLELELLITLAAIHPWLVKTSTCCAKFFNPEELFEIEKLKHDAKKGS
KVMFVLNLVFRVVKREKILIFCHNIAPIRLFIELFENVFRWKRGRELLTLTGDLELFERG
RVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQ
KVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIFSEEFVEDPSLWQAEKIEDDVLREIVEE
DRVKSFHMIMKNEKASTGG
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagcattactatgagttgaaccattcgtttgatccatgtcctttcgaggtc
ttctgctcggggacatggaaagccgtcgagtacttaaggatcgagaatggagtgatggcg
atgcaacttctggaaaacgggcatgtattagaagatgtaagaccttttcagaggcttcgt
cttagatcaagaaaggcgacttcgatcgactgtaactcttttctacggcatggcgtcgat
gtttgtgttctctatcacaaaagtgtctctttggatgaagagactccagagcatgacatg
gagccggtttgggttgatgcaaagattgtatctatagagaggaagccacatgaatccgaa
tgcttgtgtaatttctatgtcagcatttatatagaccaaggctgcatcggttcggagaaa
catagaattaatagagcttcagtgctcgtgggactcaaccaaatctctgttctccagaag
tttttcaaggagcaaagcatggaccggttctacagatggagattctccgaggactgtgct
tcgctggtggaaacaagactaacccatggcaagttcttgcctgatcttacgtggttgttt
gttacatcagtcttgaaaagcattgtgtttcacatcagaacaattcaggagaagatggtt
tatcagattgtgacggatcaagactcacaaggctctagtagttctctgagtgcaatgaat
atcacggtggaagatggagtttacatatccaaggtggttttgttcaatccagatggggat
gatggtactcatcaagatcctgatgtacagcaagaaagtgaagaggaggtaatggagctg
cgtcgatccaagagaagacacgtgcggcctgatagattcgctttctctgagagtcagcta
gattcaaaggatggatgggtaaggatgatgccatataggtacagcacttggagtgttttt
agtgatgatgacgaagaagattgtgaagatgatgatgatgatgatgatgattatgatgat
ggagataccgatgatgatttgtacataccgttatcacatttgtttggaaaaaagggaagc
gcaaagggatttagtaagagtaaacaaagagagattgttttggaagacaaaacagagagg
aagaagaagatgaagatgaagaaaagagagggatttggtcggaattctgagttgtccgtt
attcctttcactccggtgttagaacctataccattagaacagtttggtctcaatgcaaat
agtttgtgtggtggtgtctctgggagtaatttgatggatgagatagataagtatcgtagt
aaagctgctaaatacgggaagaagaagatgtctgaaatggatgagatggagtctgatctg
tgttggaaagacaacctccggaagtctttccaaaaactaaaaggacctcattcccgaaga
cggtctgtttctgggaaaactggaaattccgatgaaccacagatttatacgaagagaaca
ttgagcgcaggtgcgtataacaagctgatagattcatacatgagtaatatcgattccaca
attgcagccaagaacgaagcaaccagtgttgtagagcagtgggaggagttaaagaacttc
acaagcacttcaatggaagccgaagacatgtgcagtgaggatgatgatgatgatgatgat
gatggggagacgtcagagaacgagatgttatggagggaaatggaactatgtttggcttct
tcttacattcttgatgatagtgaggtgagagtggataacgaggcgttccagaaagcaacc
ggtgattgtaaacatgattttgagttgaatgaagaaatcggaatgtgttgcagattatgt
ggtcatgttggaacggagataaaacatttttctgcaccttttgcgcaacacaagaaatgg
accacagagactaagcagattaacgaagatgacattgatactaaggtgaaacaagatgaa
gtcgagagccgcaatttcacaatgaccgttgttgctgcgtcctcggaaactccctctgcc
gaagagagtgacaacgtttggtcactgatacctcagcttaaaagaaaactgcatatgcac
cagaggaaagctttcgagtttctctggagaaacctagccggatcagtggttcctgcaatg
atggatccgagttcagagaagattggtggctgcgtggtttctcacactcccggagcaggc
aaaacatttctgatcatagcttttcttgcgagctacttgaagatattccccgggaagagg
cctttggttcttgctcccaaaacaacattgtacacatggtacaaggagttcatcaaatgg
gagattcccgtcccggttcacttgatccatggacgcagaacctactgtgtggtcaaagag
aacacgattcagttcaagggagttccaaaaccgagccaagatgttaggcatgtgattgac
tgtttagacaagattcagaaatggcatgcacagccgagtgttcttgtaatgggttacaca
tcgtttctaacactgatgagggaagattccaagtttgctcataggaaacacatggctaaa
gtactgagagaatctcccgggcttgtgattctagacgagggacacaacccgaggagtacc
aagtcaagattacgaaaggccttaatgaaagttgacaccgatttgaggatcttgctttcg
ggtacattgtttcagaacaacttctgtgagtacttcaacactctgtgcttggctagaccc
aagtttgttcatgaggttctaatggagttggaccagaagttcaataccaaccaagctgtg
caaaaggcgcctcacttgcttgaaaacagagcgaggaaattatttcttgacattatagcc
aggaaaatcgacacaaaagtgggagatgagcgcttgcagggtctcaacatgttgaagaat
atgaccagcagtttcatcgataactatgaaggaagcggaagcggaagtggtgatgttctc
ccgggtttgcagatctacacattgttgatgaattctacagatttacagcacaagactctt
actaaacttcagaacataatgtcgacttaccatggatatcccctcgagctcgagcttctc
ataaccttagcagctatccatccttggttggtcaaaacctctacatgctgtgcgaaattc
ttcaaccctgaagagcttttcgagatcgagaagctcaagcatgacgccaagaaaggatcg
aaagtcatgtttgtgcttaaccttgtgttccgggtggtcaagagggagaaaatcctcatc
ttctgccacaacatcgcgccaatccgtctgtttattgagctgtttgagaatgttttcagg
tggaagagaggcagagagctcttgaccttaacaggggatcttgagctgtttgagagagga
agagtgatagacaaatttgaagaacctggaggccagtcccgtgttcttctggcctcgatc
acagcctgtgcagaagggatcagcctaaccgctgcttcacgggtgatcatgcttgactct
gagtggaatccttctaagacaaagcaagcaatcgcacgagcgttcagaccaggacagcag
aaagtggtgtatgtttaccagctcttgtccagaggaacacttgaggaagacaaatacagg
aggacgacttggaaagagtgggtctcgagtatgatcttcagcgaagagtttgtagaggac
ccgtctctgtggcaagctgagaagattgaagacgatgttctcagagagatcgttgaggaa
gacagagtcaaatcctttcatatgatcatgaagaacgagaaagcttcaaccggtggataa
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integrated database retrieval system