Eutrema salsugineum (saltwater cress): EUTSA_v10024240mg
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Entry
EUTSA_v10024240mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10024240mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10024240mg
Membrane trafficking [BR:
eus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
EUTSA_v10024240mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EUTSA_v10024240mg
Exosomal proteins of bladder cancer cells
EUTSA_v10024240mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
Beta-prop_ACSF4
BPS1
ENTH
Beta-prop_At4g14310
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-GeneID:
18028354
NCBI-ProteinID:
XP_006411704
UniProt:
V4MD98
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHKCNFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKDDLVVSASLDQTVRVWDIGALRKKTVSPADDLLR
LSQMNADLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHP
EMNLLAAGHDSGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEFSTQRDSQVIPIRRPG
TASLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSIGRSDFVQEAKRGTGGSAIF
IARNRFAVLEKSTNQVLVKNLKNEVVKKGTLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ
QRLVLGDLQTPFVRYVVWSNDMESVALLSKHTIIIATKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDNGIIKTLDVPIYITKVTANIIFCLDRDGKNRIITIDATEYI
FKLSLLRKKYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI
SVAVASATEINEKDQWYKLGVEALRQGNAGIVEFAYQKTKNFERLSFLYLITGNLDKLSK
LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLHDVAERLASEL
GDNLPSLPQGKTPSLLMPPTPVMCGGDWPLLRVMKGIFEGGLENGATGAVDDEEDAEGVW
GDELDMDVDGIQNGDVDDSLQDAEGADENDEEVGWDVDDLELPPELDTPKTSGNARSSVF
VTPTPGMPVNQIWSQKSSLAAEQAAAGSFDTAMRLLHRQLGIKNFAPLRSMFLDLFTGSH
SYLRAFSSSPVVSLAIERGWNESASPNVRGPPALVYDFSQLEEKLKAGYKATTTGKFTEA
LRVFLSILHTIPLVVVESRREVDEVKELIIIVKEYVLGLQMELKRREMKGDATRQQELAA
YFTHCNLQTPHLRLALLSAMSVCYKAKNLATASNFARRLLETNPTVESQAKTARQVIQAA
ERNMTDETKLNYDFRNPFVICGATYVPIYRGQKDVSCPYCTARFVPGQEGNICTVCDLAV
IGADASGLLCSPSQVR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagttcgagacgaagagtaacagagttaagggcctcagctttcacaccaag
aggccatggattctcgcgagtttacacagcggcgtgatccagttgtgggattaccgtatg
gggacgctgatcgataggtttgatgagcacgagggacctgttcgtggtgttcacttccac
aaatcacagcccttattcgtctcaggaggggatgattacaagattaaggtctggaactac
aaaacacacaagtgcaatttcactcttctcgggcatcttgattatatccgcacagtgcag
ttccaccacgagtacccttggattgtgagtgctagtgatgatcagactattcgcatatgg
aactggcaatcacggacttgtatttctgtattgactggtcacaaccattatgttatgtgt
gcttccttccatcctaaagacgaccttgtcgtatcagcttccttagaccagactgtccgt
gtttgggatattggcgctcttaggaagaagacggtatctcctgctgatgacctgctgcgt
ttgagtcagatgaatgctgatctttttggtggtgttgacgctatagtcaagtatgtgctc
gaaggtcatgacagaggagtcaactgggcttcttttcatcctactttgcctctcattgtc
tctggggcagatgaccgccaagtaaagttgtggcgcatgaatgaaactaaagcctgggag
gtggatacattgcgaggccatatgaataatgtgtcatctgttatgttccacgcaaaacag
gacataattgtctctaactctgaggataaaagcatccgtgtctgggacgctaccaagcga
actgggcttcagactttccgccgcgaacatgatagattctggattctcgcagttcaccca
gagatgaatctactggcagcgggacatgacagtggtatgatcgttttcaagcttgagaga
gaacgtcctgcatttgctttaagtggcgattccttattttatgccaaggataggtttttg
cgatactatgaattttcaactcagagagactcacaagttatccctatacggcgtcctggt
actgcaagcttgaaccaaagtccaaggactttatcttacagtccgacagaaaatgcagtg
ctcatctgctcagatctggatggtggttcttacgagttgtacatcataccgaaagatagc
attggcaggagtgactttgtgcaagaggcaaagagggggactggtggttctgcaattttc
atagcccggaatcggtttgctgttcttgagaaaagcaccaatcaagtgctagtcaagaat
ctcaagaacgaggtggttaaaaagggtaccctgccaatacctactgatgccatattttat
gccggtactggaaatcttctttgcagatctgaggataaagtggttatttttgaccttcag
caaagacttgttctcggtgatcttcaaactccgtttgttaggtacgttgtttggtctaat
gatatggagagtgttgctttgctcagcaagcatactatcattatagcaaccaagaagctt
gtccaccagtgcacccttcatgagacaatccgtgttaagagtggagcttgggatgataat
ggtgtcttcatctacacaactctgaaccatataaagtactgtcttccaaatggcgataat
ggaataattaaaactctggacgtccctatatacatcacaaaagttactgcaaatatcatt
ttctgcttggatcgagatgggaagaaccggattattaccattgatgcaacagagtacatt
ttcaagctttcactgctgagaaagaagtacgaccatgtaatgagcatgataagaaactcc
cagctgtgtgggcaggctatgatcgcttatctgcagcagaaaggattccctgaagttgcc
ctccatttcgttgaagatgaaaggattcgatttaacctggctcttgaaagtggcaacatc
agcgtcgctgttgcatcagctacagagattaatgagaaagatcaatggtacaaacttggg
gtggaggctcttcgccaaggtaatgctggaattgttgagtttgcttaccagaagactaag
aattttgagaggctttcttttctctatctcattactggaaatttggacaagctgtctaag
ttgatgaagattgcggaagtgaaaaacaatgtcatgggtcagtttcacaatgctctctat
ctaggagatgttaaagagcgtgtgaagatacttgagaatgctggccatttgcctcttgcc
tatatcacggcttcagttcatggtttacatgacgttgctgagcgattggcaagtgagtta
ggagacaacttgccttctttgcctcaaggtaaaactccgtcgcttctaatgcccccaacc
cctgttatgtgtggaggtgattggcctcttcttagagtcatgaaaggaatatttgaagga
gggcttgagaatggtgcgacaggggctgttgatgatgaagaagatgccgaaggcgtttgg
ggtgatgaacttgatatggatgttgatggaatccagaacggtgacgtggacgattccttg
caagatgcagaaggagctgacgagaacgatgaagaagttggatgggatgtcgatgactta
gaattaccaccggagcttgatacaccgaagacttccggtaacgcacgttcatcggttttt
gtgacgccaactccgggcatgcctgtgaatcaaatctggagccagaagtcatctcttgct
gctgagcaggctgcagcgggtagctttgacactgcaatgcgtttgcttcacagacagctt
ggcataaagaactttgctccgttgagatcgatgttcctggatctatttaccggaagccat
agctatctccgtgcgttttcttcttctcctgtggtgtcacttgccattgagcgtggctgg
aacgaatccgctagtcctaacgtccgtggcccaccagctctggtttatgatttctctcag
cttgaagagaagctcaaggccggttacaaagccacaacgacaggaaaattcacagaggct
ctgcgtgtcttcctctctatcctccacacaatccctctcgttgtagttgagtcaagaaga
gaagttgacgaggtcaaagagctgatcatcatcgtgaaagaatatgtcctcggtctgcaa
atggaactgaagagaagggaaatgaaaggtgacgcgacacggcaacaagagctcgctgct
tatttcactcactgtaacctccaaactcctcacttacggctcgctcttctcagtgctatg
agcgtctgctataaggccaagaacctagccactgcttctaactttgcgagaaggttatta
gagacaaacccaaccgtggagagtcaggccaagacagcaagacaagttatccaagctgct
gaacgcaacatgaccgatgaaaccaagctaaactatgatttcaggaacccttttgtgata
tgcggtgcgacttatgtaccgatctacaggggacagaaggatgtctcatgtccgtactgc
accgcccggttcgtgccaggtcaagaaggtaacatctgcaccgtgtgcgatcttgcagtc
attggtgcggatgcatcgggcttgctctgctctccttctcaagtccggtga
DBGET
integrated database retrieval system
