Eutrema salsugineum (saltwater cress): EUTSA_v10024243mg
Help
Entry
EUTSA_v10024243mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10024243mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EUTSA_v10024243mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
Helicases
EUTSA_v10024243mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DHX37_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
HTH_51
ATPase
AAA_19
Motif
Other DBs
NCBI-GeneID:
18030397
NCBI-ProteinID:
XP_006414901
UniProt:
V4MI97
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MMGENCDLDIMPPRKKNKGSNKMCDKLNLKKKTILSKSQKRKLKKLEEDKEKEIISAKTA
ELLDKYKISEDMSSLLQSSTVIGRSATKLEKRRRAMQLSKAGVVTDHHSDESVEQRDDFD
SCISEATSPEHAETPVPSFEAAPEQQIRTPEQEVCQEDVDMILLQTSRRDDEEDSERMDE
DVTVQGPRVASFVVHVTRPAEVEETRKDLPIVMMEQEIMEAINYHPTVIISGQTGCGKTT
QVPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDK
KIGENSSIKFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE
YYEEQKKSLQSGGTIASENQIIMPLKLILMSATLRVEDFVSGKRLFPKSPPLIEVPTRQY
PVTIHFSKKTEIGDYIGQAYKKVMSIHRKLPQGGILVFVTGQREVDYLCEKLRKSSKELV
DQAAKRDASEKKKCEDAGSFGGVDMKEIAEAFDDGSQGEDPSETGDYRDDFEEEEDMNES
DEESDWETVDDGFANSFDEEGKKLDALRAAFNALAGKKESESAEPTRSIAAENQETEEEK
KTFAPGKLRVLPLYAMLSPAAQLRVFEEVEEGERLVVVATNVAETSLTIPGIKYVVDTGR
AKVKNYDIKTGMETYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFDESSPPE
ITKVPVDGVVLLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGRLTPLGKA
MSHYPMSPRHSRMLLTVIQMLKEAQNYSRANLVLAYAVAAVAALSLPNPLIMQFEGEKKT
ESEEDAGKTVKQEDKQRRKDRKDKIKAARDKFSNPSSDALTVAYALHSFEVSENGMGFCE
SYGLHLKTMNEMSKLKDQLLRLVFSCCKPCETGNVFSWTHGTIQDVEKSWRVTASLSSSK
SPLLQNEEELLGEAICAGWADRVARKTKSTEYQACAVQEPVFLHRWSSLINSAPELLVYS
ELLLTNRPYMHGATRVKPEWLVKHAKSLTVFSAPLKDPKPYYSSEVDRVFCWVVPSFGPH
LWELPAHSVAVRDDRDRAAAFGCALLQGEVLPCLRSVRQLLAGKPETLLEREAWGLERVG
SLVRALEEKKIDSLESLRQIWEQNSNVLYLEIQAWFQKNSRHLVKELWQRMLQEAEVLPF
ERSGKLKRSRR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgatgggggaaaattgcgatttagatataatgcctccaaggaagaagaataaaggatca
aataagatgtgtgataagctgaatctaaagaagaagacgatactgagcaaatcacagaaa
cggaagctgaagaaattggaggaagataaggagaaagagatcatctctgcaaaaaccgca
gagttgttagacaagtataaaatatcagaggatatgtcgtcgcttttacaatcctcaaca
gtgatcggaagatcagctacgaagctggagaaacgtaggagagcaatgcaactctctaaa
gctggtgttgtgactgatcatcattctgatgaatcagtcgagcaaagagacgactttgac
tcttgtatctccgaggctacatcaccggaacatgctgaaaccccagttccgagctttgaa
gctgctcctgagcaacagattcgtacccctgaacaagaagtctgccaagaagatgtggat
atgattctactacagacaagtcggcgtgatgatgaagaagactcagagagaatggatgaa
gatgtaactgtacaaggacctcgtgtggcctcgtttgtagtccatgttacaagaccagcg
gaagttgaagagacgaggaaggatcttccgatagtaatgatggagcaggagataatggaa
gctattaattatcatcccaccgttatcatttcaggacaaaccgggtgtggtaaaaccact
caggttcctcagtttctttatgaagctggttttggttcaaagcaattcagttctcgaagt
gggattatcggtataactcaaccacgccgtgtcgctgtccttgccaccgccaagagagtg
gcgtttgagcttggtgtccgtctcggtaaagaagtcgggtttcaagttaggtacgacaag
aagattggcgaaaactcctctatcaagtttatgaccgatgggattttacttcgtgaaatt
cagaatgatttcttgttgaggcgatactctgtgataattctcgatgaagcacatgagaga
agcttgaacacagacattctaattgggatgctcactcgggtcatcaaaatccgacaagaa
tactacgaggagcagaaaaagtctctacaatctggaggcacaatagcctcagagaaccaa
atcatcatgccgcttaaactgatattgatgagtgcaactttgcgagtggaagattttgta
tcggggaaaaggttattccctaagtcacctccgcttatagaggttcccactcgacagtat
cccgtaactatacatttctccaagaagactgagattggtgattatatcggtcaagcctat
aagaaagtgatgtcgattcacagaaagttaccacaaggaggaatacttgttttcgtgacc
gggcagagagaagttgactatttatgcgagaagttgcggaagtcttcaaaggaacttgtt
gatcaagctgctaaaagagatgcttccgagaagaagaaatgtgaagacgctggttcattt
ggtggtgttgacatgaaggagattgctgaagcatttgatgatggctcacagggagaagat
ccttctgaaacaggtgactatcgtgatgattttgaagaagaagaagacatgaatgagtct
gatgaagaaagcgactgggaaaccgtcgatgacggctttgccaattcatttgacgaagaa
gggaagaagcttgatgctctccgagcagcgtttaatgctttggcaggcaaaaaggaatcc
gaatctgctgagccaacaagatccattgcagcagagaatcaagaaactgaggaggaaaaa
aaaacatttgctccaggaaaactacgcgttctcccgctttacgcgatgctatctccagct
gcacagctccgagtgtttgaggaagttgaggaaggagaaagacttgtggtcgtggcgact
aatgtagcggaaacttctctgactattcctggtataaagtatgtggttgatacgggtcgg
gctaaagtgaagaactacgacatcaagactggcatggaaacttatgaagtagattggatt
agtcaagcttcggctagtcaacgagctggaagagctggacgaactggacctggtcactgt
tatcgtctctattcatctgctgtttttagcaacatattcgacgaatcttcccctcctgaa
atcaccaaagtccctgttgatggagtcgttcttcttatgaaatctatgaatattccaaag
gttgagaatttcccgtttccaactccgcctgagccatcagctattagagaagcagaacga
tgcttaaaagctttagaggctctcgacagcaacggacggttaactccattagggaaggct
atgtctcactatcccatgagtccacgtcactcaagaatgcttctcacagtcatccaaatg
ctaaaagaggctcagaattactcccgcgcgaatcttgtcctcgcatacgcagttgcagct
gtagccgcgttgagtttaccaaaccctttgataatgcagtttgaaggagagaagaaaacc
gagtctgaagaagatgcaggcaaaaccgtaaagcaggaagataaacaacggagaaaagat
cggaaagacaagatcaaagccgcgcgggacaagttttccaacccgagcagcgacgctttg
acggtagcttacgcgttgcattcctttgaggtctcggagaatggaatgggcttctgcgag
tcgtacggcttgcatttgaagaccatgaacgagatgtctaagctcaaagatcagcttttg
cgtcttgttttcagctgttgcaagccttgtgaaactggaaacgttttctcatggactcat
gggactatacaagacgtagagaagtcatggagagtcaccgcgtctttgtcttcctcaaaa
agcccgcttttacagaacgaagaagagctcttaggagaagccatatgtgcgggatgggca
gaccgtgtagccagaaagactaaatcgacggagtaccaagcctgcgcggttcaagaaccg
gttttcttgcaccgttggtcgtctctcataaactcggccccagagttgttagtctacagc
gagctcctactcaccaacagaccgtacatgcacggtgcgacacgtgtgaagcccgagtgg
ctggttaaacacgcaaagtctctcactgtgttctccgctccgctcaaggacccgaaaccg
tattactcgagcgaggtggatagagttttctgctgggtcgttcctagtttcggtcctcat
ctttgggagcttccggctcatagtgtggcagtaagagacgatagagaccgagcagcggct
tttggatgcgcattgcttcaaggagaggtattgccttgtttgagaagcgttaggcagtta
ctggctgggaaacctgaaacgttgttggaaagagaagcttggggtttagaaagagttggg
agtttggtgagagcgctggaagagaagaagattgatagtttggagagtttgagacagatt
tgggaacagaattcgaatgtgctttacttggagattcaagcttggtttcagaagaattct
cgtcatcttgttaaagagctctggcagagaatgcttcaagaggctgaggttttgcctttt
gaacgatctgggaagttgaagaggtcaaggagatga
DBGET
integrated database retrieval system
