Eutrema salsugineum (saltwater cress): EUTSA_v10024245mg
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Entry
EUTSA_v10024245mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EUTSA_v10024245mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10024245mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
EUTSA_v10024245mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
HATPase_c
RFamide_26RFa
DNA_mis_repair
DUF6300
Motif
Other DBs
NCBI-GeneID:
18028279
NCBI-ProteinID:
XP_006412094
UniProt:
V4MEA2
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MKTIKPLPEGVRHSMRSGIIMFDMARVVEELVFNSLDAGATKVSIFVGVGTCSVKVVDDG
SGVSRDDLVLLGERYATSKFHDFNNAEAASESFGFRGEALASISDISLLEITTKAIGKPN
GYRKVMKGSKCLHLGIDDDRKHSGTTVTVRDLFYNQPVRQKYMQASPKKVLDSITKCVFR
IALVHSDVSFSVLDIESDEELLQTNPSSSAFSLLIRDAGTEALNSLCKVNVTDGMLNVSG
FVSKGPIHKLLNNLAAGFECTDDWKPTDGLQTGRRNRLQSSPGYILCITCPRHLYEFSFE
PSKTNVEFKNWEHILALIGRIILANWKKDASLELFDEGVDLLAKGDRQDLSDDMSRLQKG
AQIFIMLPLYNYLVEWAGIYFSSLYISRQPLPMLHLMDAEWPEGMEPTKKKLKRCNDQAP
CSFLLSPSADFQRDDDSMPQIKDKWSPKYEFETKIQNFKEEDTAAEFDRQTDYLLQSCDI
EMQKNEDFPLATDLQERRLVSCAKCSKQFLTRCQTSTPLNINHDVLKDSDVLSFQFGGFK
DESDVSNCIEKHLLRGCSSRGSLILHEPKLSHVEGTESVMPQILNDKRSNSLIHALETRE
GGSHCDVFSDTLELHGMTRTPTCSLGSSWQDTDWFTPQPFSDCRSVGVREYFNINPLDTA
EFCSSKDIIVKKKYASSVNMGSSGAGSFRLSSEWSPMFSIPPSATRWESDFQKGCQILEG
SLKLGRMPDPEDFFSAANSIKFDHEVIPQIDCRETGRDSFSDIQNCTQSDEKKFQSLWGH
ADNVDIEQYSIRKDKFRFRDGIQNNVGKRRSQRSRSAPPFYREKNRFISLSCRSDTKLEN
SIPSEPDDLECLTQPCNASHMHLKCSILDEVSNDHIQETEKRLSSASDLKVSAGCRIVQS
ETRVEDEDEDFSSEENPETIKSTTKWRHNYSVSQVAKESHELHDQDSVLDICSGFLHLRS
DESLVPESINRHSLEDAKVLQQVDKKYIPIVACGTVAIVDQHAADERIRLEELRKKVLAG
EARTVTYLSADKELVLPEMGYQLLQSYSEEIRDWGWICNIDVEGSTSFKKNMSIIQRKPT
PITLNAVPCILGVNLSEVDLLEFLQQLADTDGSSTIPPSVLRVLNSKACRGAIMFGDSLL
PSECSLIIEGLKQTSLCFQCAHGRPTTVPLVNLKALHKQIAKLDSRQPWHGFERSEITLD
RAKSRLDEAKS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcaagcccttgccggaaggtgttcgtcactctatgcgctccggaatcatc
atgttcgacatggcgagggtcgtggaggaactcgtcttcaacagtctcgatgctggtgcg
accaaggtttctatcttcgtgggtgttggtacatgctctgtgaaagttgtggatgatgga
tcgggcgtttccagagatgatttggttttgttgggagaaagatatgctacgtcaaagttt
cacgacttcaacaatgcggaggcagccagtgaaagttttggcttccgaggagaggcctta
gcttcgatatcagatatctcgttactggaaatcacgacaaaagctattgggaagcctaat
ggttatcgaaaagttatgaagggatccaagtgtctacatctgggaattgatgatgacaga
aaacactctggcacaactgtaactgtccgagatctattttacaatcaaccagtgagacaa
aaatatatgcaagccagccccaagaaagtgttggactcgataacaaagtgtgtgttccgg
attgcccttgtgcactctgatgtttccttcagtgttcttgatattgaaagtgatgaagag
cttttgcaaaccaatccttcttcatcagcattttcactactgataagagatgcagggacc
gaggctttgaattctctttgtaaagtaaacgttacagatggcatgctgaatgtctctgga
ttcgtaagcaaaggtcccatacataagctgttgaacaacttggctgctggtttcgagtgt
acggatgactggaagcctacagatgggctacaaacaggaagacgtaatagacttcaatcc
agtcctggttacatattgtgcataacatgtccccgtcatctttatgaattctcgtttgaa
ccatcaaagacgaacgtcgaattcaagaattgggaacatatacttgccttaataggaaga
atcattctagccaactggaagaaggatgcaagtcttgaactctttgatgagggagttgat
ctactggcaaaaggtgatagacaagacctgagtgatgacatgagtagacttcaaaaaggt
gcacaaattttcataatgttaccattatataattatttagtggaatgggccggcatctat
ttttcctcgctttatatttccaggcagcctttaccaatgctgcatcttatggatgcagag
tggccagaaggtatggaacctacaaaaaagaagctcaagagatgtaatgatcaggcacct
tgtagttttctcttgtccccgtctgctgactttcaaagagatgatgatagtatgcctcaa
ataaaggacaagtggtctccaaaatatgaatttgaaacgaaaattcagaatttcaaagag
gaagacactgcagctgaatttgaccgtcagactgattatcttctacagtcatgtgacata
gaaatgcaaaagaatgaagactttccactagctactgaccttcaagaaagaagattggtt
tcttgcgctaagtgcagcaaacagtttctaacaagatgccagactagcacacctctcaat
attaaccatgatgtcctgaaagattcagacgtattaagttttcagtttggaggatttaaa
gatgagtcggatgtcagcaattgcattgaaaagcatctcttgcgtggttgctcctcaaga
ggaagcctcattcttcatgagcctaaactatctcatgttgaaggcactgaatcagtcatg
cctcagatacttaatgacaaacgaagtaattcactgattcatgccctagagaccagagaa
ggtggttctcactgtgatgttttttctgatactcttgaacttcatggaatgacgaggact
cctacttgttcccttgggagttcatggcaggatactgattggtttactccacaacctttt
tcagattgtagaagtgttggggttagagaatattttaacatcaaccccttagatactgcg
gaattttgttcttctaaagacataattgtcaagaaaaagtacgcttcctctgtcaatatg
gggagctctggtgctggtagtttccgtttgagttctgagtggtctccaatgttctccata
cctccttctgcgaccaggtgggagtctgattttcagaaaggttgtcaaattcttgaaggg
agtttgaagctgggaaggatgcctgaccctgaagattttttcagtgccgctaatagcatc
aaatttgatcatgaggtcatacctcaaatcgattgccgggaaactggcagagattctttc
tcagatattcagaactgcactcagtcagatgaaaaaaaattccagtcattgtgggggcat
gcggataatgttgatattgaacaatatagtatcaggaaagacaaattcagatttagggat
ggcatacagaataatgttggtaaacgaaggtcacaaagaagccgctctgctcctccattt
tatcgagagaaaaacagatttatcagtttaagttgtagatcagacacaaaattagagaac
tctattccatcagaacctgatgatttggagtgcttgacacaaccttgtaatgcatctcat
atgcatcttaagtgcagcatccttgatgaagtgtcaaatgaccacatacaagaaacagaa
aaaagattgagttcggcctcagacttgaaagtatctgctggttgcaggattgtgcagtcg
gagacccgagttgaggatgaagacgaagacttcagctcagaggaaaatccggaaacaatt
aaatccacaacgaaatggcgccataactattcagtctctcaagttgccaaagaatcacac
gagcttcatgatcaagatagtgtacttgatatatgttcaggttttttgcacctccgatcc
gatgaatcattggttcctgaatctataaacagacactcccttgaagatgccaaagttcta
caacaggttgataaaaaatatatcccaattgttgcttgtggaacagttgccatcgttgat
cagcatgctgccgatgaaagaattcgtttagaagagctgcgtaaaaaggtcctggctggg
gaagcaaggacagtcacctatttgagtgcagacaaggagttggtactgccagagatgggt
tatcagttactccagagttattcagaggagataagagactggggttggatctgcaacatt
gatgtagaaggatcaacgtcctttaagaagaacatgagcatcatccaacggaaaccaact
ccaatcacacttaatgcggtcccatgcattctgggtgtaaatctatcagaggttgatcta
ttggagtttcttcagcagcttgctgatactgacggatcatcaacaattcctccatctgtt
cttcgagtcctaaattccaaggcatgtagaggtgcaattatgttcggagattctctgtta
ccctcagagtgctctttaatcatcgaaggactgaagcagacctcactttgtttccagtgt
gctcatgggcgaccaacaacagttcctctagtcaatttgaaggcattgcacaaacagata
gcgaagctcgattccagacaaccgtggcacgggttcgaacgcagtgaaatcacacttgat
cgtgccaagtcacgcttagatgaagctaaaagctaa
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