Eutrema salsugineum (saltwater cress): EUTSA_v10024253mg
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Entry
EUTSA_v10024253mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12122
phytochrome D
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
EUTSA_v10024253mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
18031049
NCBI-ProteinID:
XP_006414374
UniProt:
V4MK39
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MVSGGGCETNGEAASSSSHRVEQSSRRTTNHLQEQAQSSPSKPLRSSQNKPQNHGGAGGT
ESMSKATQQFTLDARLHAVFEQSGESGKSFDYSQSLKSTTNGSSVPEQQITAYLSRIQRG
GYIQPFGCLIAVDESTFTIIGYSENAREMLGLMSQSVPSIEEKSEILAIGTDLRFLFKPS
SIVLLERAFVAREITLLNPVWIHSKNTGKPFYAILHRVDVGIVIDLEPARTEDPALSIAG
AVQSQKLAVRAISHLQSIPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAES
KRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVRVVQDDRLTQSICLVGST
LRAPHGCHAQYMANMGSIASLALAVIINGNEEDGNGGGRNSMRLWGLVVCHHTSARSIPF
PLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQSPSIMD
LVKCNGAAFLYRGKYYSLGVAPTENQINDIVEWLLANHSDSTGLSTDSLGDAGYPRAAAL
GDAVCGMAVAYITKSDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVV
KSQCQPWETAEMDAIHSLQLILRDSFKESEAMEAKAAASGAVQPHGEDGAEQGMVEIGAV
AREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVDEAMGKSLVGDLIHKEYEEAV
DRLLSCALKGDEGKNVEVKLKTFGAELQGKAVFVVVNACSSKDYLNNIVGVCFIGQDVTS
HKTVMDKFINIQGDYKAIIHSPNPLIPPIFASDENTCCLEWNTAMENLTGWPRSEVIGKL
LVKEVFGSCCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRRGKFIQALLTMNKRVN
PNGEVIGAFCFLQIPSLELQQALEIQRRQESECFSRGKELAYIIQVIKNPLSGLRFTSSL
LEATDLSEDQKQYLETSVSCEKQISKIVGNMDAKSIEDGSFQLERTEFIIGSVINAVVSQ
AMLVVRERNLQLIRNIPMEIKSMVVYGDQIRIQQVLADFLLSIVRYAPTEGSVELHVHPV
LKQMADGFSAIRIEFRMACAGEGVPPEKVQDMFHSSRWTSHEGLGLSVCRKILKLMNGEV
QYIRKFERSYFLILIELPVPLMPS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggaggtggttgtgaaaccaacggtgaggcagcttcgtcgtcaagccaccgc
gtcgaacagagcagccgtcgcacgactaatcacctccaagaacaagctcagtcgtcgcca
agtaaacccctaagatcatcacagaacaagccgcaaaaccacggcggcgccggcggcaca
gagtcgatgagcaaagctacccaacagttcactctcgacgccagacttcacgccgtcttt
gagcagtccggtgagtccggcaagtcgttcgattactctcagtccctcaaatcgacgacg
aacggttcctccgtaccggagcagcagattacggcttatctctctcggatccagcgcggc
ggttatatccagcctttcggatgcttaatcgccgtcgacgaatccaccttcaccatcatc
ggttacagtgaaaatgcacgggaaatgctagggctcatgtctcaatctgttccaagcatc
gaggaaaagtcagagattctagcgattggcacggatttgcgcttcctcttcaagccgtcg
agcatcgttctcctcgaacgcgccttcgtggcccgagaaatcacgctcttaaacccagtt
tggattcactctaagaacactggcaaacctttttacgcgattcttcacagggtcgatgta
ggaatcgtgatcgatttagaaccggctcgaaccgaagatccagcgctttcaattgccggt
gcggtccaatcgcagaaactcgcagtccgggcgatttctcatttgcaatcgattcccggc
ggcgacatcaagctcctctgtgacactgttgtggaaagcgttagagatctcactggttac
gaccgtgttatggtgtacaagtttcatgaagacgaacacggtgaggtcgtcgctgagagt
aaacggaacgatttagaaccttatattggcttgcattatccagctactgatattcctcag
gcatctcggttcttgttcaagcagaaccgtgttagaatgattgtagattgccatgcgtca
ccggttcgtgttgtccaagacgataggctcacgcagtctatatgcttggtgggttcgact
ctacgagctcctcacggctgtcacgctcagtacatggctaacatgggctctattgcgtcg
ttggccttggccgtgataataaatggaaatgaagaagatgggaacggtggaggaagaaac
tcgatgaggctttggggtttagtcgtttgccatcacacatcggctcgttccatacctttt
cctctgaggtacgcttgtgagtttctaatgcaggcctttggcttacagctaaacatggag
ttgcagttagccttgcaggtgtctgaaaaacgtgttctgagaatgcagactttgttatgc
gacatgcttcttcgtgattctcctgcagggattgtcacgcagagtccgagcatcatggat
ttggtaaaatgtaacggcgcggcgtttctttaccgagggaagtattattcgttgggtgtg
gctccgactgagaatcagataaatgatattgtggagtggttgcttgctaaccattctgat
tctactggtttaagcactgatagtttaggcgatgcgggttatcctcgagcagctgcttta
ggggatgctgtttgcggtatggcggtcgcgtatatcactaaaagtgacttcttgttctgg
ttccggtctcataccgagaaagagatcaaatggggaggggctaagcaccatcccgaggat
aaagatgatggccagcgaatgcatccacgttcttcgtttaaggcttttctcgaagttgtt
aagagccaatgtcagccgtgggaaactgctgaaatggacgctattcactcgctccagctt
attctaagagattctttcaaggagtctgaagcgatggaagctaaagccgctgcttctggt
gcggttcagccacatggagaggatggggcagagcaagggatggtggagataggtgcagtt
gcgagagagatggttaggctcattgagactgcgacggtccctatatttgctgtggatatc
gacggctgcattaatgggtggaacgccaagatcgcagagcttactggtctttctgttgac
gaagctatgggaaagtctctggttggagatttgatacacaaagagtacgaagaagcagtt
gataggcttctttcttgtgctctcaaaggagacgaaggcaagaatgtggaggtcaagctg
aaaacttttggtgccgagctacaagggaaagcggtgtttgtggttgtcaacgcatgctca
agcaaggactacttaaacaacattgttggggtctgctttattggacaagatgtaactagt
cataaaactgttatggacaagttcatcaatatacaaggcgactacaaggccatcatccat
agcccaaaccctctgatccctccaatatttgcatcggatgagaacacgtgctgcttggaa
tggaacactgcaatggaaaatctcacaggctggcctcgcagtgaagtgattggcaaattg
cttgttaaggaagtgtttgggagctgttgcaggctaaagggtcctgatgcgttgactaag
ttcatgatcgttttgcataatgcgattggtggccaagacacagataaattccctttcccg
ttcttcgaccgcagagggaaattcattcaggctctcctgactatgaacaaacgggtcaac
cccaacggtgaggtcattggagctttctgtttcttgcagataccgagtctcgagctgcaa
caagctctagagatccagcggaggcaggagagtgagtgcttctcgaggggtaaggagttg
gcttacattatccaagttataaagaatccattgagcggtttgcgtttcacaagttcattg
ctagaggccacggatttaagcgaggatcagaagcagtatcttgaaacaagtgtttcatgc
gagaagcagatctcaaagattgtaggaaacatggatgccaaaagcattgaagacggttca
tttcagttagagagaacagagttcatcattggcagcgtcataaacgcagtggtaagccaa
gctatgttggtggtgagagagagaaatcttcagctgatccggaacatccccatggagatc
aaatccatggttgtctatggtgaccagataaggatccaacaagtcctggcggattttttg
ctaagtatcgtccgttatgcacccactgaaggctctgtggaactccatgtacacccggtt
ttgaaacaaatggctgatgggttctctgctatacgcatagagttcaggatggcgtgtgca
ggggaaggtgtgccgccggagaaagtgcaagatatgttccacagtagccgatggaccagt
catgaaggattagggctaagcgtttgtaggaagattctgaagctaatgaacggagaggtt
cagtacataaggaaattcgaacgctcttatttcctaatccttatcgagctcccggtccct
ctgatgccctcttag
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