Eutrema salsugineum (saltwater cress): EUTSA_v10024321mg
Help
Entry
EUTSA_v10024321mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10024321mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10024321mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10024321mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EUTSA_v10024321mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EUTSA_v10024321mg
PBAF complex
EUTSA_v10024321mg
GBAF(ncBAF) complex
EUTSA_v10024321mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
FAP206
Motif
Other DBs
NCBI-GeneID:
18029514
NCBI-ProteinID:
XP_006412227
UniProt:
V4LSV8
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MEEKRRDAGTLASAGSSGDSPASEPATRRRAGALKRKANALGTSNSSSTSYKRMLTREKA
MLASFSPVHNGPLTRARQAPSNMPSAAGVKSEPLNVAVGTDGEKPKEEEERNKAIREWEA
LEAKIEADFEAIRSRDSNVHVVPNHCGWYSWERIHPLEERSLPSFFNGKLDGRTSEVYRE
IRNWIMRKFHSDPNTQIELKDLAELEVGDTEAKQEVMEFLDYWGLINFHPFPSSLADASS
TAGDHDDLGDKESLLNSLYRFQADEACPALVHKPRLTAQATPSGLFTDPMAADDLLKQEG
PAVEYHCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVG
SGKWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQTDYKDP
STKDTTDLAVSKDDKSVPKDAPEETENKNRVDEVETMKEVPEPENDNEGKVSQGSSKPGD
ASQDTDEVEADQKTPKQETVSDERCKDEADENIALKALTEAFEDVGYPITPEASVSFADL
GNPVMGLAAFLVRLAGSDVATASARASIKSSGLLLATRHCFILEDPPDNKKDSTESKSVD
AAANDDNTHKDEQPEEKSQKAEDVSLNLDDREMLDIDPGKKNQDSVSEEKQPGSRTENSA
RNPDAERENGSSKSVATGNSEKPADIICPSQEKCSGKELQEPLKDENKLSSENKDASQAT
VDQSAGDASQPEASKDVEMKDTSQSEKDPQDMVKTVGEEVEQAKEGAKDVLSKPELSIAQ
QPIVSASVPENGTTGEITNKEGNKEKDVSEGTKEKHNIDKLKRAAISALSAAAVKAKALA
KQEEDQIRQLSGSLIEKQLHKLEAKLSIFNDAESLTARVKEQLERSRQRLYHERAQIIAA
RLGVPPSMSSKASLPTNRIAANFANVAQRPPMGMAFPRPPMPRPPGSLVAATAMTGSSDP
PPGSDNVSSV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaacgacgcgatgctggaaccctagcttcggctggtagctctggagattct
ccggcatctgagccggcaacgcggcggcgcgccggagctttgaagagaaaagcgaatgct
ctcgggacctccaattcctcttccacatcgtacaagaggatgttgacgcgcgagaaggcg
atgcttgcgtctttttctccggtacacaacgggcctcttactagagctcgacaggcaccg
agcaacatgccgtcggcggctggggtgaagtcggagccgttgaatgtcgcggtgggtacg
gatggcgagaagccgaaggaggaggaagaacgaaacaaggcgatccgtgagtgggaggct
ttggaggctaagatcgaagctgatttcgaagcaattagatctcgcgacagcaatgttcat
gtggtgcctaatcattgcggttggtattcatgggaaagaattcatccgctggaggagcgt
tcattgccctctttctttaatggcaaattggatggtcgcacttctgaggtatatagggaa
atacggaattggatcatgaggaagtttcattctgatccgaacacacagatagaattaaaa
gacttagcagaactcgaggttggagacacggaagcaaaacaagaggtgatggagttcttg
gactactggggcttaattaattttcacccattcccatcctcattagcagatgctagttct
accgctggtgatcatgatgatttaggggataaagagtcactgcttaacagtctataccga
tttcaagcagatgaggcttgccctgctcttgttcacaagcctcgtctcacagcacaagct
acgccatcagggttgtttacagatccaatggctgctgatgacttactgaagcaagagggt
ccagcagtcgaatatcactgcaactcctgttcagctgattgctctcgcaagcgctaccac
tgccccaagcaggcagattttgacttgtgtacggaatgctttaacagtggcaagttcagc
tcagatatgtcatcttctgattttatactgatggagcctgctgaggcccctggcgttggt
agtgggaagtggactgaccaagagactcttcttctccttgaagctttagaaatcttcaag
gaaaattggaacgagattgcagagcatgttgctacgaaaacaaaggctcagtgtatgctt
cattttcttcaaatgccaatcgaggatgcatttcttgatcaaactgactacaaagatcca
agtacaaaagacactacagatttagctgtgtctaaagatgataaatctgtcccaaaagat
gcacccgaagagacagaaaataagaatcgtgttgatgaagttgaaactatgaaggaagtt
ccagaaccagaaaatgacaatgaaggaaaagtttctcagggatcttcaaagcctggagat
gcgagccaagacactgatgaagtggaagctgaccagaaaacgcccaagcaagaaaccgtc
agtgatgaaagatgtaaagatgaggctgatgaaaacattgctctgaaagctctgactgaa
gcttttgaagacgttggttatcccattacacctgaagcctctgtttcctttgctgattta
ggaaatcctgtcatgggactggcagcctttctggtaagattggcgggatctgacgttgct
actgcttcagcccgggcttccataaaatcttctggactgttgctcgctacaagacattgt
tttattctggaagatccaccagataacaagaaggattcaactgaatcaaaaagtgtggat
gcagcagcgaacgatgataatacacataaagatgagcagccagaagaaaaaagccaaaaa
gcagaagatgtctccttgaatttagatgatagggaaatgctagatattgatccaggcaaa
aagaatcaggattcagtctcagaagaaaagcaacctggttctcgaactgaaaattcggct
agaaatccagatgctgaacgagaaaatggatctagtaagtcagtcgcaactggcaattct
gagaaaccagcggatataatttgtccatcgcaggaaaaatgctctgggaaggagcttcaa
gaacctttgaaggatgaaaataagctttctagtgaaaataaagacgcttctcaagcaact
gtcgatcagtcagctggagatgcttctcagccagaagcatcaaaagatgtggagatgaag
gatacatcacagtcagaaaaggatcctcaagatatggtcaaaacagtaggagaggaggtt
gaacaggctaaggagggtgcaaaggatgttcttagtaagccagagttgtctattgcacag
cagccaattgtatcagcttctgtaccggaaaatggaacaactggtgaaattacaaataaa
gaaggaaacaaagagaaggatgttagtgaagggacaaaagaaaaacataacatagataag
cttaagcgtgcagctatctctgctctctcagctgcagcagtaaaagcaaaggctcttgcg
aagcaagaagaagatcaaatccgacaactttctggatcattgatagagaagcagttacat
aaactagaagcaaagctatcaatcttcaacgacgctgaaagcttgacagcgagggtaaaa
gagcaattagaaaggtcaaggcaacggctataccatgaaagggcacagataatagcagct
cggcttggtgtcccaccttcaatgtcctcaaaagcttcgttaccaacaaacagaatcgct
gcaaattttgctaatgtggctcaaagacctcccatgggtatggcctttccacgcccacca
atgccaaggcctccaggttcacttgtagctgctacagcaatgaccggaagctcagatcca
cctccaggttcagacaatgtttcttcggtttag
DBGET
integrated database retrieval system
