Eutrema salsugineum (saltwater cress): EUTSA_v10024364mg
Help
Entry
EUTSA_v10024364mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10683
BRCA1-associated RING domain protein 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10024364mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10024364mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10024364mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10024364mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10024364mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
EUTSA_v10024364mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
EUTSA_v10024364mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
EUTSA_v10024364mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
EUTSA_v10024364mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-HC5HC2H_2
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-RING_10
PTCB-BRCT
PHD_NSD
zf-Nse
VWA7_4
Motif
Other DBs
NCBI-GeneID:
18029470
NCBI-ProteinID:
XP_006413826
UniProt:
V4MFK4
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MGETNHLEKMGRELKCPICLSLFNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHRR
EIRGAPHMDSLVSIYKNMENASGVNMFVSQNKPSPSGKEKHVRDASIDKTSEKNRQGSRK
GRTSKRKEYRKTKETDVDAPGPIVMKPSSQTKKRVQLLQNHSSESLTKSTESAEKLKDYT
ENTVIRLNEDPSLNKYGNLAPFFWLRDEDDGKSLSQPESDQLLDVTPVDVPSFSDLKDSD
HESQSKVLGGDEIDLPERNPSKVASSKKKRKAGSGRNTVARLRVGVSKDDMELSAGASSS
EKQETGGSSGILTKKDRNPDVKAKRATRSKSQTSRVQADLSMSVEAEGKQGTKRKRSSVK
SSPDHLVPGSNELSLGTDIVGKGDQEQAHGSSDTQPDKQNPAEKSSLKKRRKSSESSIPK
DLSGKTEEKTSEKRSKIDSCSFLSRVRGKKILSDELNQVGDRQDSTNKKKSTADKGNRTM
QVSEKCSTMNKPSVGDSVLLRRCDGPPIDKFTCAFCQSSEDTEASGEMAHYHRGEPVSAD
FNGGSKVIHVHKNCAEWAPNVYFNNLNAVNLNVELTRSRRISCSGCGLKGAALGCYNKSC
KNSFHVTCAKLIPECRWDNENFVMLCPLDASIKLPCEETRPKERKRKRTPKESLQSQPNN
QVSETPDITELQSKPLHGLPKKLVLCCSGLTNEEKIVISEFAELSGVTISRKWEPSVTHV
IASINENGACKRTLKFMMGILEGKWILSIDWIKACLKNTKYVSEEPYEIYMDVHGIREGP
YLGRQRAINKEPKLFNELKFYIMGDFELAYKGYLQDLIVAAGGTILRRRPISNDNEASTI
VVFSVEPSKKKSLTQRRSDGEALAKSARARAASSSWVLDSIAGCQILDLI
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgggagagacaaatcacctggagaagatgggaagagaactcaagtgccctatttgcttg
agtctatttaattctgcagtttcgctttcgtgcaaccatgtcttttgcaatgcatgtatc
gtgaaatccatgaagatggatgctacttgtccagtctgtaaaatcccataccatcgtaga
gagattcgaggtgctcctcatatggatagcttggtgagcatttacaagaatatggaaaat
gcttctggggtcaacatgttcgtaagccagaataaaccatcaccatcaggaaaagaaaag
catgtgagagatgcttccattgataagactagtgagaagaatcgtcaaggatctaggaaa
ggccgaacatccaagaggaaagaatataggaaaaccaaggaaacagatgtagatgcccct
ggacctattgttatgaaaccttcatcccaaaccaagaaaagggtgcagctgttgcagaat
cactcttctgaaagtttaactaaatctactgaatcagctgaaaaactcaaggattacact
gaaaacactgtgattcgtttgaatgaggatccatctctgaataaatacggaaatctggca
cccttcttttggttgagagatgaagatgatgggaagagcttaagtcagccagaaagtgat
caacttttagacgttacacctgttgatgttccttctttcagtgatttgaaggactcagat
cacgagagccagtcaaaagtcctaggtggtgatgagattgatcttcctgaaagaaatcca
tctaaagtagcatcatcaaaaaaaaaacgtaaagcaggaagtggaagaaatactgttgct
agactacgcgttggggtttccaaggacgacatggagttatctgcaggagcaagtagtagc
gagaaacaagaaactggcgggagttctggcatacttaccaagaaggatagaaatcctgat
gtgaaagctaaacgggctacaagaagcaagagccagacttcacgagttcaggctgattta
agtatgtccgtggaggcagaggggaagcaggggacaaagaggaaaagatcaagcgttaaa
tcctctccagatcacctggttcctggatctaatgagctctcacttggaacagatattgtg
ggaaaaggggatcaggaacaagcccatggttcatctgatacgcaaccggataaacaaaat
cctgccgaaaaatcctctctgaagaagagaagaaaatccagtgaatcctccattccaaaa
gatctttctggaaaaactgaagagaagacttcagaaaagagatcaaaaattgattcatgt
tcattcttaagcagagtgcgtggcaagaaaatcttaagtgatgagttgaatcaagtgggt
gatagacaagattcaactaataaaaagaaatccactgcggataaaggcaatcgtaccatg
caagtttcagagaaatgttcaacgatgaacaaaccctcagttggagatagtgtacttttg
cgacgatgtgatggacctccaatagataaattcacttgcgccttttgtcagtcttcagaa
gacacagaggcttcaggagaaatggctcactaccacagaggtgaacctgtctctgcagat
tttaatggtggatctaaggtcatacatgttcacaaaaactgtgctgaatgggctccaaat
gtatacttcaacaaccttaacgcagtcaaccttaatgtggagttgacaagaagccggaga
ataagttgcagtggctgtgggcttaaaggcgcagcacttggttgttacaataagagttgt
aagaatagctttcatgttacgtgtgcaaaactgataccagaatgtagatgggacaatgaa
aactttgtaatgctatgccctttggatgcatccattaagttgccatgtgaagagactaga
ccaaaagaaagaaaacgcaagcgtactcctaaagaatcactgcagtctcagcctaataat
caagtatctgaaacacctgacatcactgagctccagagcaagcctttgcacggattaccc
aagaaattggttctatgctgctcaggacttaccaatgaagagaagattgtgatttcagaa
tttgctgaactgtctggtgttacaatctcgagaaaatgggaaccaagtgttacacatgtc
attgcatcaatcaacgaaaatggagcctgcaaaaggacactcaaattcatgatggggatc
ttggaggggaaatggattctaagcattgactggattaaggcgtgtctaaaaaatacaaag
tatgtaagcgaggagccatatgagatttacatggatgttcacggaattcgagaaggacct
tatcttggaagacaaagagctataaacaaggaaccaaaactttttaatgagctaaaattt
tacataatgggggatttcgagcttgcttacaaagggtatcttcaagatctgattgtagca
gcaggaggaacaatcctgcgcagacggcccatttctaatgataatgaagcttcaacgata
gtagtatttagtgttgagccaagcaagaagaaaagtctgactcaaagaagatctgatggt
gaagccttggctaaatctgctagagctagagctgcaagcagttcatgggtcttggattct
attgcaggttgccaaattctagacttgatataa
DBGET
integrated database retrieval system
