Eutrema salsugineum (saltwater cress): EUTSA_v10024452mg
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Entry
EUTSA_v10024452mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10024452mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10024452mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EUTSA_v10024452mg
Spliceosome [BR:
eus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
EUTSA_v10024452mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Helicases
EUTSA_v10024452mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ARTD15_N
Motif
Other DBs
NCBI-GeneID:
18030769
NCBI-ProteinID:
XP_006414321
UniProt:
V4MGT2
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MPGKFFFDAASDDELELLDHEEDSGDEYVEEEDAEESEGQAEAEEDEDGEEEDDVDDDEE
EEEDEKPTGKRGADAQSPWDFASYSSSVGEEHARRHTTSVDEKISKAKEHLPLPISVEEE
EEEEDENASDAEPDKQDEYLSEDDDGAELKAEDVAAKPFFSTVDGVSFNANSFMELNLSR
PLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRV
FATRVLILTPTRELAVQIHSMIQKLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVATP
GRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTLLFSATMTE
EVKELVKLSLEKPLRLSADPSARRPPGLTEEVVRIRRTREAHQEAVLLSLCTRTFKSKVI
IFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGL
DIIGVQISIMHLFFLTDERTVGRTARAGREGYAVTFVTDNDRSLLKVIAKKVGSKLKSRI
IPEQSIVKWSQIIDEMEDQYSAVIGAEREERALRKAEMEFAKAENMIEHRDEIYARPKRT
WFMTEKEKKLVAKAEKDSAGNPSGNELISADKAEDLKMKEKRKREREKNLPRKKRRKLEA
AREMLEDNEGEDEEEEEGEEEERRGRSRGKDKKKKEPEKKGLTLVDLGYRRAKAVKAKQR
AIDSGKMERPTPNKKQNLNRSKPRNQPRGEEMKDLFKSDMSEKKQGRGGGGASAKPRTKS
KNSFKSKGRYKRR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggaaattcttcttcgatgcggctagcgacgacgagctcgaattgctagaccat
gaagaagacagtggtgatgaatatgtagaggaggaagatgcagaagagagtgaaggtcaa
gcggaagctgaagaagacgaagatggagaagaggaggatgatgttgatgatgatgaagaa
gaagaagaagatgagaagcctacagggaaacgaggtgctgatgcccaatctccttgggat
ttcgcatcgtattcaagctccgtcggtgaagaacacgcccgccgacacacaacgtctgtc
gacgagaagatctccaaagctaaggagcatcttccacttcccatctctgtagaggaggaa
gaagaagaagaggatgaaaatgcctctgatgctgaacccgacaaacaagacgaatacctt
tcggaagacgacgatggagctgagctaaaagcagaagatgttgctgccaagccgtttttc
tctacggtggatggagtttcgtttaatgccaattctttcatggagctcaatctctctcgt
cctttgcttcgagcttgcgaaactcttggatacaagaaacctaccccgattcaggcagca
tgtatacctttagcacttacagggcgtgatctttgcgccagtgccatcactggatcaggg
aagactgctgcgttcgctttacctactcttgagaggttgctcttccgtcccaagcgggta
tttgctactagagttcttattctcacaccaacaagggagttggcggtccagattcacagt
atgattcagaagcttgcacagtttactgatatcaaatgtggattgattgtaggagggctt
tctgtaagggagcaagaggtggttctgaggtctatgccagatattgttgtggctactcct
ggacgtatgatagatcatttgcgtaattctatgtccgtcgatttagatgatctagcggtt
ttaattctcgatgaggcagatcgccttctacagactgggtttgccactgaaataacagag
ctggttcgcttgtgtcccaagagaaggcaaacactgctcttctcagccacaatgactgaa
gaagttaaagagcttgtcaaactctcgttggaaaaaccgttgcgtctctcagctgatccg
tcagctagaaggccaccaggcttgactgaggaggtggtaagaattcgcaggactcgagag
gcacatcaggaagctgttcttctttcattgtgcacaagaacttttaaatcgaaagtcatc
atctttagtggaacaaaacaagctgcacatagactgaaaattttatttggactcgctggc
ctcaaagcagctgagcttcatggaaacctaactcaagcacaacgtcttgattctctggaa
cttttcagaaagcaggaggttgattttctcattgctaccgatgttgccgctcgagggctt
gacatcattggtgttcagatatcaattatgcatctcttctttttaactgatgaaaggaca
gttggtagaacagctcgggctggaagggaaggttacgctgtaacgtttgtgactgacaat
gaccgatcccttttgaaagtcattgcaaagaaggtgggttcaaagttgaagagccgaatc
attccagagcagtcaatcgtcaagtggtctcagattatcgatgaaatggaagatcaatac
tctgctgttattggagcagagagggaagagcgagctctaaggaaagctgagatggaattt
gcaaaggcggagaacatgattgagcacagagatgaaatatatgcacgcccaaaaagaact
tggttcatgacagagaaggagaagaagctcgtggccaaagctgaaaaggattctgcaggg
aacccttctgggaacgaactaattagtgctgataaagcagaggacctcaagatgaaggag
aagagaaaacgcgaacgcgagaagaatcttccgaggaaaaaacgtagaaagctagaagct
gccagagagatgctagaggataacgaaggagaagatgaagaagaagaggaaggagaagaa
gaagaaagacgaggaagatcaagagggaaagacaaaaagaagaaagaaccagagaagaaa
ggactgacactagtggatcttggttaccggcgagcaaaggccgtgaaagcaaaacagaga
gcaattgattctggtaagatggaaagaccaacaccgaacaagaaacaaaacctaaaccgg
agtaaaccaagaaaccagcctcggggtgaagagatgaaagatctgttcaagagcgatatg
agcgagaagaaacagggcagaggcggtggcggggcttcagcaaaacctcgcacgaagtcg
aagaactcgttcaagagcaaaggccgatataaacgtaggtga
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integrated database retrieval system
