Eutrema salsugineum (saltwater cress): EUTSA_v10024520mg
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Entry
EUTSA_v10024520mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05391
cyclic nucleotide gated channel, plant
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
EUTSA_v10024520mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eus04040
]
EUTSA_v10024520mg
Ion channels [BR:
eus04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
EUTSA_v10024520mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
18031017
NCBI-ProteinID:
XP_006412690
UniProt:
V4MMU5
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MDSKYSQTSESALNKCTLNLQGPARGGAQGNNASSGSFKKGFRKGSKGLWSLGRSIGLGV
SRAVFPEDLKVSEKKIFDPQDKFLVLCNKLFVTSCILAVSVDPLFLYLPFVMDQEKCIGI
DRRLAIIATTLRTIVDVFYLFRMALQFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYF
IVDFLSVLPLPQIVVWRFLYTSRGANVLATKQALRSIILVQYIPRFIRIYPLSSELKRTA
GVFAETAWAGAAYYLLLYMLASHIVGALWYLLALERINGCWKKACFNSGNCTRNFLFCGN
ENMVGYAAWSTIKESVLQTSCPFNVTDDDNPPFDFGIYLRALSSGIVSSESFVAKYFFCL
WWGLQNLSTLGQGLQTSTYPGEIIFSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRV
KRRDSEQWMHHRMLPPDLRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLA
LVRRVPLFENMEERLLDAICERLKPCLYTENSYMVREGDPVNEMLFIIRGRLESVTTDGG
RSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVA
SQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLKKEEEAGEGEGSVA
SIRATFLASKFAANALRKVHKNRIAAKSTTELVKFQKPSEPDFSADEP
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggattctaagtactcgcagacttctgagtcagctcttaacaaatgcacacttaattta
caaggaccagcacgtggtggtgctcagggaaacaatgcatcatctggttcctttaagaaa
ggatttagaaaaggttccaaagggctttggtctttaggaagatcaatcggtctcggggtt
tcacgggcggtttttccagaagatcttaaagtatcagagaagaagatattcgatccacag
gacaagtttcttgtgctctgcaacaagcttttcgttacttcttgcatcctcgcggtctct
gttgatccgctcttcttgtaccttccgtttgttatggatcaagagaaatgtatcggcata
gaccggagattggctatcatagcaacaactctgcggacgatagtcgatgtgttttatctt
tttcgcatggctctacagtttagaacagcttttgttgctccttcttctcgggtttttggg
cgtggcgagcttgtgatcgaccctgcacagatagcaaaacggtatttgcagcagtatttc
atcgttgacttcctttccgtgcttccacttccacagattgtagtttggagatttctgtac
acctctagaggtgcaaatgtgctggcaacaaagcaagcgttgcgatccatcattttagtt
caatatattcctagatttatccggatatatcctttaagctcagagctaaagagaacagct
ggtgtgtttgctgaaaccgcttgggctggtgcagcttattacttgctactctacatgctt
gctagtcatattgttggggctttatggtacttactggctttagaacgcatcaacggatgc
tggaagaaggcttgctttaatagcgggaactgtaccagaaacttcctgttttgcggtaat
gaaaacatggttggttatgctgcttggagtaccattaaggaatcagttctccagacaagt
tgtcccttcaatgtgaccgatgatgacaatcctccttttgatttcggaatctacttaaga
gccctgtcttctggcattgtctcatctgagagctttgtagctaagtacttcttctgtttg
tggtggggacttcagaatctcagcactcttggtcaagggcttcaaacaagcacatatcct
ggagagattatattctccatagcacttgctatcgctgggcttctactctttgctcttctc
attgggaacatgcagacttatctccaatcgcttactatccggcttgaagaaatgagagtg
aagagacgtgactcagaacagtggatgcatcatcggatgcttccaccggacctgcgggaa
cgagtcagacgatatgaccagtacaaatggttggagacacgcggagttgatgaggagaat
ttggttcagaatctgccaaaggatctgagaagagatatcaaacgacatctatgtctagct
ttggttcgaagggttccgttgtttgagaatatggaagagaggctgctcgatgcaatatgt
gaacgtttgaagccgtgtctgtacacagagaactcttatatggttcgggaaggagacccg
gttaatgagatgctcttcataatccgtggtcggctcgagagtgtgaccactgatggcggg
agaagcggtttcttcaaccggagtttgcttaaagaaggagacttttgcggcgaggagctc
ttgacatgggcacttgatcccaaatctggttcaaacctaccgtcctccaccagaaccgca
aaggcgctaaccgaagtagaggctttcgctttgatagccgatgagctcaaattcgtggct
agccagttcaggagactgcacagcaggcaagtccagcacactttcagattctattcacag
caatggaggacttgggctgctatttttatacaagccgcgtggcggagatacgtgaagaag
aagaaactcgagcagcttaagaaagaagaagaagcaggagaaggagaagggtcggttgct
agcatcagagcgacgttcttggcatcaaagtttgctgcaaatgcacttcggaaagttcac
aagaaccgtattgcagcaaaatctactacagaactcgtgaaatttcaaaagccttcagaa
cctgacttctctgctgatgaaccttaa
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