Eutrema salsugineum (saltwater cress): EUTSA_v10024523mg
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Entry
EUTSA_v10024523mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13095
splicing factor 1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EUTSA_v10024523mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10024523mg
Spliceosome [BR:
eus03041
]
Complex A
Other components
Complex A specific factors
EUTSA_v10024523mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
PHD_4
zf-CCHC
RapA_C
RRM_7
KH_PNO1_2nd
Motif
Other DBs
NCBI-GeneID:
18029260
NCBI-ProteinID:
XP_006414750
UniProt:
V4MSE7
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MDSVELNQYNHSSHALDNPPPSSEALDSSTASDQLNPQIPTSEFTRDLVSEKGVSKTMSG
TEKDQSGGEEENTSRSRKRRSRWDSSPPKRKSRWADDEPKPIIQLPDFMEFDPEVQVLNA
RLLEISRILQSGLPLDDRQEGQRSPSPEPIYDNNGIRVNTREYRAKERLNRERQEIISQI
ISKNPAFKPPADYRPPKLQKKLFIPKNEFPGYSFIGLIIGPRGNTQKRMQRETGAKIVIR
GKGSVKEGRHQQKKFDPSENEDLHVLVEADTQESLDAAAGMIEKLLQPVDEVLNEHKRQQ
LRELATLNGTVRDEEFCRLCGEQGHRQYACPSSATTFKSDVLCKICGDGGHPTIDCPVKG
NTGKNMDDEYKNFLAELGGTVPESSLKQSGTTLAIGPGSNPPWGNSAGLGSNPIKPSKEY
DETNLYIGFLPPMLDDDGLINLFSSFGEIVMAKVIKDRESGLNRGYGFVKYADVQMANAA
IQAMNGYRLEGKTLAVRIAGKPPPPTSPQSRTQAYPPSNHLPGAYPSQQYPSGVRLPNPP
PPPVPSYYPYAPPPGCYHPVAGQHMSPYGMHYPPPPPPHMAQAPPPGTASQNPPSSESQQ
SFPPGVQPDKGAPASSVPPNVYVSSVTGLPGQPPYMSYPYYNAVRPPVPASSTDLGNMTW
ANNPPVPTVDQSQGLGNAPWASNPSMPTTDDYSQRMGSVPWAPKPPGQPSAENASAPGDS
EYDKFMAEVM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggattccgtcgaattgaaccaatacaaccattcttcgcatgccctagataatcctcct
ccttcctctgaagccctagattcctccactgcttcggatcaactaaatcctcagattccg
acttcagaattcacgcgcgatttggtatcggagaaaggcgtgagcaagacgatgagcgga
actgaaaaggatcaatccggcggagaagaggagaacacaagccggagtaggaagcgtcga
agccggtgggactcttctccaccgaagcgtaaatcgagatgggcagacgatgagccgaag
ccgataatccagcttcccgatttcatggagtttgatcccgaggttcaggttttgaatgct
aggttacttgagattagtaggattttgcagtctggtttgcctttagatgatagacaagaa
ggacagagatctccttcaccagagccaatctacgataacaatggaattagggtaaacact
agagagtatagagcaaaggagaggttgaacagagaaagacaagagattatctctcagatt
atcagcaagaatcctgcgtttaaaccccctgcagattatagacctcccaagctccagaag
aagctttttatcccgaagaacgagtttccaggttacagctttatcggtcttataattggc
cccagaggaaatactcagaagagaatgcagagggagacaggtgctaagattgtgattcgt
ggtaaaggctctgttaaagaaggtagacaccagcagaagaaattcgacccttcggagaac
gaagacttgcatgttttagtcgaggctgatactcaggaatctcttgacgctgctgctggt
atgatagagaagctcctgcaacctgttgatgaggtgctgaacgagcacaagaggcaacag
ctcagggagcttgccacgttgaatggaacagtaagggatgaggagttttgtagattgtgt
ggtgagcaagggcatagacaatacgcgtgtccttcgagtgcaactaccttcaagagcgat
gttctttgcaagatttgtggtgatggtggacaccctactattgattgccctgtgaagggt
aatactgggaagaacatggatgatgaatataagaacttcttggctgagttaggaggaact
gtacctgaatcttctctcaaacagagtggtacgacattggctattggtccgggaagtaat
cctccatggggtaacagtgctggcttagggtcaaatccgatcaaaccctccaaagaatat
gatgaaacgaatctgtacattgggtttttacctccgatgcttgacgatgatggtttgatt
aatcttttttcatcttttggtgagattgtgatggcaaaggtgatcaaggaccgtgagtct
ggtctgaacagaggctatggttttgtaaaatacgctgatgtccagatggctaatgctgct
atacaggcaatgaatgggtatcggctagaaggtaaaacacttgctgtgaggattgctggt
aaaccgccaccgcctacttcacctcaatcacgcactcaagcttaccctccttcaaatcat
ctgcctggtgcctatccttcacagcagtatcccagtggcgtgcgactgccaaatcctcct
cctcctcctgttccttcctattacccatacgctcctccacctggttgttaccatcctgtc
gctggtcaacatatgtctccgtatggtatgcactacccaccacctcctcctcctcatatg
gcacaagctcctccaccgggcactgcttctcaaaatccaccttctagtgaaagccagcaa
agttttccaccaggggtgcagccagacaaaggtgctcctgcttcatctgtgccaccgaat
gtctatgttagctcagttacaggtttgcctgggcagcctccatatatgagttatccttat
tacaatgctgttcgacctcctgtacctgcctcgtctactgatctgggtaacatgacatgg
gccaacaatcctcctgttccaacagttgatcagtcacaaggtcttgggaatgcaccctgg
gcatcgaatccttctatgccgaccactgatgactattcacagagaatggggagcgtaccc
tgggctcccaagccgccaggacagccatctgcagagaatgcgtcagctcctggagattct
gagtatgacaagttcatggctgaggtgatgtaa
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