Eutrema salsugineum (saltwater cress): EUTSA_v10024545mg
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Entry
EUTSA_v10024545mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10024545mg
03460 Fanconi anemia pathway
EUTSA_v10024545mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10024545mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10024545mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EUTSA_v10024545mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
EUTSA_v10024545mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
EUTSA_v10024545mg
Bloom's syndrome complex (BTR)
EUTSA_v10024545mg
FA (Fanconi anemia) pathway
EUTSA_v10024545mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
18028254
NCBI-ProteinID:
XP_006412066
UniProt:
V4MAZ0
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MEKSPLPMQNVHRSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT
GGGKSICYQIPALAKPGIVLVVSPLIALMENQVIALKEKGIAAEYLSSTQPTHVKNKIHE
DLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWGHDFRPSYR
QLSTLRDSLADVPVLALTATAAPKVQKDVIDSLSLRNPLVLKSSFNRPNIFYEVRYKDLL
DNAYTDLCKLLKSCGNICAIIYCLERTTCDDLSVHLSSSGISSAAYHAGLNSNLRSTVLD
DWLSSKKQVIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYY
GVDDRKKMEFILRNSEKKNSPSSKTPISDFQQIVTYCEGSGCRRRKILESFGEEFPVQKC
KKTCDACKHLNQVAHCLEELMTTASRRHNSSRIFIASSNDKTNEGQYSEFWNRNEDGSNS
DDEISDSDDGAEAAKCLAGPKLSKKLGLEEKMVLLERAEEKYYESNKQVKKFEKNVISET
LRESSKKRLLDELARVLELLAGLEEIDPQNASEFLENECYRKYSKAGKSFYYSQIVSTVR
WLGTASRDELMARLSSVVTLAREEEPSGESLRSTEPAENIEEEDGKIYTAESWVEKPTQQ
KLVVSPSRSPIRLPPIPSFSEFVNRRKMKRSTSLDNSSESFDDKKPAKIMKLQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcgccgttaccgatgcagaatgtgcaccgctccgataaaaatgttgctgga
aaagaagcattagtgaagcttttgagatggcattttggtcatgcagatttcagagggaag
caactggaggcgattcaagctgttgtatctggaagggattgcttttgcttgatgcctacg
ggaggaggaaaatcgatttgttatcagatacctgcactagctaaacctggaattgtgctt
gttgtttctcctttgatcgctttgatggaaaaccaagtgattgctctgaaggagaaaggt
attgctgctgagtatctctcatccacgcaacctacacatgttaaaaacaagatccatgaa
gaccttgattctggaaaaccctcagtaagattgttgtatgttactccagagttgattgcg
accaaaggatttatgttgaagctgagaaaactccattccaggggtttactgaatcttata
gccatagacgaggcacattgcatctcatcatggggccacgacttcagacctagctatcgt
caactttcaaccttgagagattctttggctgatgttccagtgttggctctaaccgctact
gctgctcctaaggtacaaaaggatgttattgactccttgagtttgcggaatcctttggtc
ttgaagtcttcttttaatcgcccaaacatcttttatgaagttcggtataaagatctttta
gataatgcgtatactgatttgtgcaaattgctcaagtcatgtggaaatatttgtgcaatt
atctactgccttgagcgtacaacttgtgatgacttgtctgttcatctttccagttctggg
atctcttctgctgcctatcatgcaggacttaatagtaacctgaggagtacagttttagat
gattggctgtcctcgaagaagcaagttattgttgccacagtggctttcggaatgggtata
gataagaaggatgtcagaatggtttgccattttaacattccaaaatcaatggaatctttc
tatcaagagtctggtagagcaggtcgggatcaactaccctcgagaagtgtattatactat
ggtgtagatgatagaaagaaaatggaatttatactacggaattcggagaagaagaattcc
ccatcctcaaagacgcctatatctgactttcagcagattgtgacatactgtgaaggttct
ggatgccgaagaagaaagattcttgagagctttggtgaagagtttcctgtgcagaaatgc
aaaaaaacgtgtgatgcatgtaagcatctaaatcaagttgctcattgcttagaggagctc
atgactactgcctcccgaagacacaattcttctcgaattttcattgccagctcgaacgat
aagaccaatgagggacaatactccgagttctggaatcgtaatgaagatggaagcaattcc
gatgacgaaatatcagattcagatgatggcgctgaggctgccaagtgcctagcaggacct
aaactatcgaaaaagttgggactagaagagaaaatggttttactggagcgggctgaggaa
aaatactatgaaagcaataaacaggtcaaaaagtttgagaagaatgttatatctgaaaca
ctaagggaatcgagcaagaagcgactcttggatgaactggcacgagtacttgagctgctc
gccggtttagaggagattgatccccaaaacgcatctgagtttcttgaaaacgagtgctat
agaaagtatagcaaagcagggaaatcgttttactactcgcagatagtgagtactgtgaga
tggttaggaacggcaagcagagacgagctaatggcccgactaagctcagtggtcactttg
gctagagaagaagagccatcaggagaatcgttgcggtcgactgaaccagcagagaacata
gaggaagaagacggaaagatatacacagccgagtcatgggtcgagaaaccaacacaacag
aagctcgtagtgagcccgagtcgttcgccaataaggctcccaccaattccgtcattctca
gagtttgtcaaccggagaaagatgaagcgtagcacatctttagacaattcttctgaaagt
tttgatgacaagaaaccggcaaagataatgaagctacagtga
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