Eutrema salsugineum (saltwater cress): EUTSA_v10024555mg
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Entry
EUTSA_v10024555mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03030
DNA replication
eus03420
Nucleotide excision repair
eus03430
Mismatch repair
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUTSA_v10024555mg
03420 Nucleotide excision repair
EUTSA_v10024555mg
03430 Mismatch repair
EUTSA_v10024555mg
03440 Homologous recombination
EUTSA_v10024555mg
03460 Fanconi anemia pathway
EUTSA_v10024555mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10024555mg
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10024555mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10024555mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EUTSA_v10024555mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EUTSA_v10024555mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EUTSA_v10024555mg
MMR (mismatch excision repair)
EUTSA_v10024555mg
DSBR (double strand breaks repair)
HR (homologous recombination)
EUTSA_v10024555mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
BRCA-2_OB1
DUF223
Fer4_10
Fer4_9
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
18029640
NCBI-ProteinID:
XP_006414005
UniProt:
V4MQQ0
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MEVILTAGAIEKIHNEEVKSQEEMVPVLQVMDLKSVQTQQKDPTKERFRMCLSDGTYLQQ
GMLGITQSNLVKSGMLQVGSIVRLTHFTCSKIQDKWIVVIVQLEVITTKSDIIGHPVFKG
KSSNQRGSDSGNKSNNKTELAETGSSVVAMSPQVGQQRQVFGSASSSGPSSSLPGLTPST
RAYNNPSAVHGVSRQDHARVPPTNYPPPPAPMYSNRGPVARNDAPPRIIPINALSPYSGR
WTIKARVTSKGELRHYNNQRGDGKVFSFDLLDADSGEIRVTCFNAVADQFFDQIVVGNLY
LISRGSLRPAQKNFNHLSNDYEIMLDNASTIQQCYEEDAAIPRHQFHFRSIGDIESMESN
SIVDVIGIVSSISPTGLIMRKNGTETQKRALQLKDMSGRSVEVTMWGNFCNAEGEKLQRV
CDSGGFPVLAVKACRISDFNGKALSTIGSSQLFIEPDFVEAQKLKEWFEREGRSVPCVSI
SKEFSGNGRVDVHKTISQIKDEKLGTSEKPDWITVTATIIYMKFDNFCYTACPIMNGDRP
CSKKVTDNGDGTWRCEKCDKCVDECDYRYILQLQLQDHTGLAWVTAFQEAGEEIMGMPAK
DLYYVKYEHMDEEKFEDIIRKVAFTKYIFKLKVKEETYSDEQRVKATVVRVDKLNYSSGT
KTILDAIDKLRTENASSLPNKLEGSHYNADAINTGVESSGTIDPS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgattttgacggcgggggcaatcgagaagatacataatgaggaagtgaagagc
caggaagagatggttccggttctgcaagtgatggatttgaagtcggttcagactcagcag
aaagatccgacgaaggagaggtttaggatgtgtttatcagacgggacctacttacaacaa
ggaatgctcgggattactcagagcaaccttgtcaaaagtgggatgcttcaagttggttcc
attgttagactcactcatttcacctgtagcaagatccaggacaaatggattgttgtcatt
gtgcaactggaagtgattacaacgaagtctgatataattgggcatcctgtattcaaagga
aagtctagtaatcagcgtggatcagattctggtaataagtcaaataataagactgaattg
gctgagacagggagtagtgttgtagctatgtcacctcaagttggtcaacaaagacaagtg
tttggttctgcttctagttctggtccgagttctagtcttcctggactaacaccttccact
cgagcatacaacaatccatctgcagttcatggagtctctaggcaggaccatgctcgtgtt
cctccaaccaattatcctccaccaccagcaccgatgtattcaaataggggaccagtggca
aggaacgatgctcctcctaggataatcccaatcaatgctcttagcccgtattcgggtagg
tggaccatcaaggccagggtcacgagtaaaggagagcttaggcactacaacaatcagcgt
ggggatgggaaagtttttagttttgatcttcttgatgctgatagtggagagatacgggtt
acttgtttcaacgcagtggctgatcagttctttgaccagatcgttgttggtaatctttat
ctgatttcaagggggagtttgaggcctgctcagaagaatttcaatcatctttctaatgac
tacgaaatcatgctggataatgcatcgacgatacaacaatgctacgaggaagatgctgcc
attccgcgacatcagtttcatttccgttccataggtgatatcgaaagcatggagagtaac
agcatcgttgatgtaattggcattgtgtcatcgatcagtcctacggggttgataatgagg
aaaaacggaactgagacacagaagagagctcttcagttgaaggatatgtcaggtcgaagt
gttgaggtaaccatgtggggtaacttctgcaatgcagaaggagagaagctgcaaagagtc
tgtgactctggtgggtttccggttcttgctgttaaggcatgcaggatcagtgactttaac
ggaaaggcgttgagcaccattggatcaagtcaactgttcattgagccagatttcgttgaa
gctcagaaactgaaggaatggtttgaaagagaagggaggagtgtcccttgtgtttccata
tctaaggagttttctggtaatggcagagtagacgttcacaaaacaatttctcaaattaag
gatgaaaaactaggaacctcggaaaaaccagactggattacagtcactgctactattata
tacatgaagtttgacaacttctgctacacagcttgtcctatcatgaacggtgatcgtcca
tgcagcaaaaaggtcacagacaatggagatggcacatggaggtgcgaaaagtgtgataaa
tgcgtggatgaatgtgactacaggtatatcttgcagctccaattacaggaccatacaggt
cttgcatgggtcacagctttccaggaggctggtgaagagataatgggcatgcctgctaaa
gatttgtattatgtgaagtatgaacacatggatgaggaaaagttcgaagatatcatccgt
aaggttgcttttaccaaatacatcttcaagctgaaggtgaaagaagaaacatatagcgat
gaacagcgtgtgaaagcaacagttgtgagagtagacaagctaaactattcgtcaggtacc
aagactattctagatgccatagataaactcaggacagagaatgcaagttctctccccaac
aagctagaaggatcccattacaacgctgatgcaattaacactggtgttgaaagctcaggg
accatagatccctcataa
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integrated database retrieval system
