Eutrema salsugineum (saltwater cress): EUTSA_v10024612mg
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Entry
EUTSA_v10024612mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EUTSA_v10024612mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EUTSA_v10024612mg
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
18030074
NCBI-ProteinID:
XP_006411824
UniProt:
V4MDI0
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MISQKKIASSMICLLLFLLLPIAFSEPTRILDGRSARAPTVQQIRNRHGTREVIVDNGII
RVSFSSPQGLITGIKYKGIDNVLNPHLRARGYWDVTWQGENIRQGLDRIEGTKFRIITQN
EEQVEISFSRRWNGGSRHIPLNVDKRYIIRKNTSGIYTYGIFERLPEWPEVEMGLIRIAF
KVNPDRFHYMVVADNRQREMPTDDDRDIHRGHAKALAYKEAVQLTHPHNHLFENQVDDKY
QYSCEIKDNKVHGWISTKSHVGFWLISPSDEYRSGGPIKQELTSHVGPTTLTTFISEHYV
GKDMETNYRAGEAWKKVLGPVFIYLNSDSTGNNPRKSLWEDAKRQTKEEVEAWPYDFVAS
SDFPSRQERGIVTGRLLVNDRFLTPARSAYVGLAPPGQAGSWQTNTKGYQFWTKTNETGY
FTIDNVRPGAYNLYGWVPGFIGDFRYQNRVNVAAGSKISLHSVVFEPPRNGPTLWEIGVP
DRTAREYYVPEPYKNTLNPLYLNHTDRFRQYGLWERYTELYPNHDLVYTIGVSNYTQDWF
YAHVTRKIDDSTYEPTTWQIKFHLPYVNWRGSYTLQLALASASRANLQVRFNNENSRPFF
STGNIGRDNAIARHGIHGAYRLYSINVPGRLLRTGTNTIYLRQAKAMGPFEGLMYDYIRL
EGPSRD
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcagaaaaagatagcttcgtcaatgatctgtttgcttctctttcttcttctt
ccaatcgcgttttctgagccgacaaggatattagatggaagaagtgcaagagctccaaca
gtgcagcagatacgaaacagacatggaactagagaggtgatagtggacaatgggataatc
agagtcagtttctcgagtcctcaaggacttataactgggatcaaatacaaaggaatcgat
aatgtccttaatccgcacctccgagctcgagggtactgggacgtaacatggcaaggagaa
aacattcgccagggcttggatagaatcgaaggaaccaagtttagaatcataactcaaaac
gaagaacaagtggagatttcgttctctagaagatggaacggtggttctcgtcatattccg
ttaaacgtagacaagaggtatattatacgtaaaaatacttcaggaatctacacatacgga
atcttcgagagactcccggagtggccagaagtcgagatgggtctaattcgaatagcattc
aaagtcaaccctgatagattccattacatggtggttgccgataaccggcaaagagaaatg
ccaacggacgatgaccgtgacatccatcgtggccatgccaaggctcttgcttacaaagag
gctgtccaattgactcatcctcataaccatctgttcgaaaaccaggtggatgataagtac
cagtactcatgtgagataaaggacaacaaggtgcacggttggatctcaaccaagtcacac
gttggtttttggctcatctcaccgagcgacgaataccgctctggtggaccgatcaaacag
gagctcacttctcacgttggtcccacgaccctcacgacctttataagcgagcattatgtt
ggtaaggacatggagacaaattacagagctggtgaagcgtggaaaaaggtcttgggacct
gtttttatttacctaaactctgattctaccggcaataatcctcgcaagtcattatgggaa
gatgctaaacgacagaccaaagaagaagttgaagcctggccgtacgattttgtagcctcc
tctgacttcccttctcgtcaagaaagaggaatcgttaccggtcgacttttagtcaatgac
agattcttgacaccggcacgatctgcatacgtcggtttagcaccaccgggacaagctggt
tcatggcagacaaatactaagggttatcaattttggacaaagacgaacgaaaccggctat
ttcacgattgataacgttagaccgggagcttacaatctgtacggatgggttcccggtttt
atcggagactttagataccaaaaccgtgttaacgtagctgcaggttcaaagattagtctc
catagcgtcgtgttcgagcctcctaggaacggtccaacgttgtgggagattggtgtaccg
gatcgaaccgcacgagaatactatgtaccggaaccttacaagaatacattgaatccctta
taccttaaccacacagacaggtttaggcagtacggattgtgggaacgatacacagagttg
tatccaaatcatgatctcgtctacacaattggtgttagtaactatactcaagactggttc
tacgctcatgtcacaagaaaaattgatgattcgacctacgaaccaacgacatggcagatt
aagtttcatcttccatacgtgaactggcgaggaagctacacattgcagctagctttagcc
tcggcttcacgggctaatctacaagtgcggttcaataacgaaaactcgaggcccttcttc
tcaacaggtaatatcggaagagacaatgctatagcaagacatggaatccatggagcctat
cggctttatagcatcaatgtacctggaaggttactaagaaccgggaccaacacgatttat
ctacgtcaggccaaagcgatgggaccttttgaaggtcttatgtatgattacattcgtctt
gaagggccttctagagattag
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