Eutrema salsugineum (saltwater cress): EUTSA_v10024642mg
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Entry
EUTSA_v10024642mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EUTSA_v10024642mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10024642mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EUTSA_v10024642mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
HAT
Motif
Other DBs
NCBI-GeneID:
18028912
NCBI-ProteinID:
XP_006412984
UniProt:
V4MGM2
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MADVVQYRLERMVEDFDDLERRGIFTNAEIREIVKQRRKFEYRLKRPSPLKQDFLAYIDY
ESQLDELRSLRRKAVSRHSEKKKKKSISDFAGVQKIVEIYRLATMRYKGDINLWFRYIEF
CKQKRNGRMKKVLAQVIRFHPKVPAVWMHAAAWEFDRNLNVAAARALMQNGLRVCPNSED
LWVEYLRMELTYLNKLKTRRVALGEDKGSLVRDKKNVEDEKWKDENKELFMSLDEKEGND
DSDVEDVEDVSEKVDVFREKGSNVLQAIYSGAVEALPSSFELRKRFLEILEATDLAHSDE
IRNTILSDLKRDFYKDPEYWNWLARHEMCGCISKETGVEFANPQLQKAIQVFEEALQTVT
SSSMFEMYIKFLMETIAWSNGDNNDDVSASFNPAGDCISHLINVYQKADGTGCLTEELAS
EYVSLYLKLGKTHEAQKLAEKLSSGKFAGSAKLWLSRVYIEIGSLSTNSSPTKAELQSVF
EVLSNALRNVPISESESLWLMAFEFYAHQRTYFDKLVEMSILSVAKGNNGSDHEFCLASV
VVKFVLEKKGIHNAREIYKRFVALPRPGLVLYKDCIEIETKLASQGDKDSLRNARKLYDS
AVASYSQDVELWKDYYSLETKLGTSETANGVYWRARKTLKGSADFIVG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttgttcagtaccgcctcgagcggatggttgaagactttgatgacctagaa
cgtagaggaatcttcacgaatgcagagattcgagagatcgttaagcagcgccgtaagttc
gagtaccggctaaagcggccgagcccactcaaacaggactttttagcctacattgactac
gagtcacagcttgatgagctgcgaagcttgcggaggaaggcggtgtcgcgtcattctgag
aagaaaaagaagaagtcgatttctgatttcgccggtgtgcaaaagattgtggagatttat
aggcttgcgaccatgaggtataaaggcgatatcaatttgtggtttaggtatatcgagttc
tgcaaacagaagaggaatggtagaatgaaaaaggtcttggctcaagttataagatttcat
cctaaagtgcctgcagtgtggatgcatgctgcggcgtgggaatttgatcgaaacttgaat
gttgctgcagctcgtgctcttatgcagaatggtttgagagtgtgtccaaactctgaagac
ttgtgggtggagtatctgcggatggaactcacctaccttaataagcttaaaactcgtaga
gttgcactcggtgaagataaaggaagtttggtgcgtgacaagaaaaacgtcgaggatgaa
aaatggaaagatgagaataaagagctgtttatgtcgctagatgagaaagaaggaaatgac
gactctgatgtggaagatgttgaggatgtgagtgagaaagttgatgtctttcgagaaaaa
gggtctaatgttcttcaggccatttatagtggagccgttgaggctcttccgtctagtttt
gaattgaggaagcgttttttggaaatcctagaggcaacagatttggcgcattcagatgaa
atccgcaatacgattctaagtgacctgaagcgtgatttttacaaggatcctgaatactgg
aattggcttgcaagacatgaaatgtgtggttgtattagcaaagagacgggcgtagagttt
gcgaatcctcaattgcaaaaggctattcaggtttttgaagaggctttacaaactgttact
tcaagttctatgtttgagatgtatataaagtttttaatggagactattgcatggtcaaat
ggcgacaacaacgatgacgtttccgcttcgtttaatccggctggggattgcatttcacat
ctcataaatgtgtaccaaaaggctgatggaaccgggtgtttgaccgaggagcttgctagt
gaatatgtttcattgtacttgaaactgggaaagactcatgaagctcagaagctagcagaa
aagctttcctctggaaaatttgcgggatcagctaagttgtggctttcaagagtttacatt
gaaataggatcactttcaacgaactcttctcccactaaggcagagttgcagtcagttttt
gaggtcctttcaaatgcgttgaggaatgtaccgatctcagaatctgagagtttatggctt
atggcttttgagttctatgctcatcagagaacttattttgataagcttgtagagatgtcc
atcctatcggtagccaaaggcaataatgggagcgaccatgagttttgtctcgcttccgta
gtggtaaaatttgttcttgaaaaaaaagggatccacaatgcaagggagatatacaagagg
ttcgtggctcttccccgtccaggtcttgttctatacaaagattgcattgaaatagagacc
aaacttgcatcacaaggtgataaagatagtctcaggaatgcccggaagctttacgattct
gcagttgcaagttatagtcaagacgtggagctgtggaaggattactactcattggagacg
aagctgggaacgtcagagacagccaatggtgtgtattggcgcgcgagaaagactctgaag
ggatcagcggatttcatagttggttaa
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