Eutrema salsugineum (saltwater cress): EUTSA_v10024774mg
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Entry
EUTSA_v10024774mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EUTSA_v10024774mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10024774mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
EUTSA_v10024774mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
EUTSA_v10024774mg
Multi subunit type E3
ERAD complex
EUTSA_v10024774mg
LMBR1L-GP78-UBAC2 complex
EUTSA_v10024774mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-C3HC4_4
Endonuclease_7
zf-RING_16
zf-RING_5
zf-RING_Vps41
E3_UbLigase_EDD
zf-HC5HC2H
RINGv
PHD
Motif
Other DBs
NCBI-GeneID:
18030148
NCBI-ProteinID:
XP_006413327
UniProt:
V4LVS7
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MGIRYLPVSVAATALSFVGLQVWTELSLDRLRADGLIAKNVSLGDSEHALELLLGSYFTI
ALLTSFVLNVYILLVLSLKTLFFGDLYAVETKKLVERLANYIIYKGTFLPLVIPPTIFQG
VLWTVWLTVLCTLKMFQALARDRLERLNASPTSTPWTYFRVYSVLFLVLSVDMLWIKLSL
MTYNTIGSSVYLLLLFEPCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFLDSM
TAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLSA
ILKRIKGYIKLRIALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTESEVNPRTVEVSSDEQLARQLERQNNPGHPLAT
GLFPAEMPNSDESDPSRNLGLDPSWLQTWSGQGVDVAGPSTASRSVGLGRVQMMMRHLAS
VGESYAQTALDDAAWSLWPMNPSQASTSSTTIPPGAGGRTGALHLRTVSSATNESLANIL
AMAETVREVMPHVPDEIIFQDLQRTNSVAVTVNNLLQM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggggataaggtacttgccggtatcggtagcagcaacagctttgagctttgtgggcctg
caagtctggacagagttgtctcttgatagacttagagcagatgggctaatagccaagaac
gtttctttaggagactccgagcatgcgcttgagctgcttcttggttcttactttacaatc
gcgctgctgacaagttttgtgctcaatgtgtatattcttctggtactttctctcaagact
ctattttttggagatttatatgccgttgaaacaaaaaagttagtggagcgacttgccaat
tacatcatttacaagggcacatttctgccgctggtgattcccccaacaatatttcagggt
gtactgtggacagtttggctgactgttctatgcactttaaagatgtttcaagctttggct
agagaccggctagaacgattgaatgcatcacctacttctacaccttggacatactttcgt
gtgtattcagtgctgttcttggttctctctgttgatatgttgtggatcaagctttccctt
atgacttacaacacaattggttcctctgtgtatctgttgttactttttgagccatgcagt
atagcttttgagaccttgcaggcgctattaattcatgggtttcagctgcttgatatgtgg
atcaaccacttagcagtcaagaactcagactgccaaagatccaagtttctcgattccatg
acagcaggctcactgttggaatggaagggcctccttaaccgtaacctaggtttcttcctg
gacatggctactttggtaatggccctgggtcattatttgcacatctggtggctgcatggc
attgcctttcatctggtggatgcagttttgtttctcaacatacgtgcattgctcagtgca
attttgaaacgaataaaaggatacattaaacttagaatagctctgggcgctctccatgca
gcccttcctgatgcaacttctgaagagttacgggcatatgatgatgaatgtgctatatgc
cgggaacctatggctaaggctaaaaggcttcactgcaaccaccttttccatcttggatgc
ctgcgatcctggttggatcaaggtctaaatgaggtttattcgtgtcctacatgtcgtaag
cctctttttgttggtagaactgaaagtgaggtgaaccctcgcacagtggaagtctcaagt
gatgagcagttagcccgtcagcttgaaaggcaaaacaatcctggacatccactagccact
ggtttatttcctgccgagatgccaaattccgatgaaagtgatccttcgaggaatttagga
ttggatccaagctggctgcagacatggtcaggtcagggtgttgatgtcgctggtccctct
accgcttctaggtccgttggactggggcgggttcagatgatgatgaggcatcttgcatct
gttggggaaagttatgctcaaactgccctggacgatgctgcttggagtctatggccaatg
aacccttcacaagcatccacgtcttctacaaccatacctcctggtgctgggggaaggaca
ggtgctctgcatctaagaactgtatcaagtgcgacaaatgaaagcttggcaaatatacta
gctatggctgagacagtgagggaagtcatgccacatgtgcctgatgaaattattttccag
gacctgcagagaacgaactctgttgctgttacagtgaacaatcttctgcagatgtga
DBGET
integrated database retrieval system
