KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10024786mg
Entry
EUTSA_v10024786mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EUTSA_v10024786mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:eus03041]
    EUTSA_v10024786mg
Spliceosome [BR:eus03041]
 Complex A
  U2 snRNP components
   U2 related factors
    EUTSA_v10024786mg
 Complex B
    EUTSA_v10024786mg
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 18031157
NCBI-ProteinID: XP_006411972
UniProt: V4LS44
LinkDB
Position
Unknown
AA seq 570 aa
MSEFEDHEGNGTAVDGFYAEDNGGHGSEIEDHIDSKSKSETRDNERESSRSKDREREKGR
DKDREKDSDRSRDRDREKSKERSREKDRDRDRDRHHRSSRHRDHSRERSERRERGSRDDD
DYRRSRDRDYDRRRDDRGDRRRRRSRSRSKGRSERRSRSRSPSKSKRVSGFDMAPPASAM
LSAGAPVTGQVPPAPPTLPGAGMFPNMFPLPTGQPFGGIPMMPIQAMTQQATRHARRVYV
GGLSPTANEQSVATFFSQVMAAVGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAM
SLDGIIFEGAPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGASGGLEGPDRIFV
GGLPYYFTEAQVRELLESFGALKGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGI
KMGDKTLTVRRANQGTMQPKPEQESVLLHAQQQIALQRIMLQPGAAATTVVCLTQVVAED
ELRDDVEYEEIMDDMKQEGEKFGALTNVVIPRPSPNGEPVPGLGKVFLKYADTESASRAR
NGMNGRKFGGNEVVAVFYPEDKFEQGDYGA
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgtctgaattcgaagatcacgagggtaacggcacggctgttgacggcttctacgccgaa
gataatggtggccacggcagcgaaatcgaggatcacatagactcgaaatctaagagtgaa
acgcgtgacaatgaaagagagagttctagaagtaaagatagagaaagagagaaggggcgt
gataaggacagagaaaaggactctgatcgaagcagagacagagatagagagaaaagcaag
gagagaagtagagagaaagacagagacagagatcgtgaccgtcatcacagaagtagtcgt
cacagagatcatagcagggaaagaagtgaaagaagagagcgtggtagtagagatgacgat
gactaccgccgaagccgcgatcgtgattatgataggcgcagagatgatagaggagataga
cgccgtcgtcggtctcgctctagatcaaagggtagatctgaacgcagatcaagatcgcgt
tctccatcaaaaagtaagcgggtcagtggattcgatatggcacctccagcctctgcaatg
ttatctgctggtgctcccgttacaggccaagttcctcccgcaccaccaactcttcctggg
gctggaatgtttcccaacatgtttcccttacctactggacagccatttgggggaattcca
atgatgccgattcaggctatgacacagcaggcgactaggcatgctcgcagagtctatgtc
ggtgggctttctcctacggcaaatgaacagtctgtggctacattttttagtcaagttatg
gctgctgttggtggaaacactgctggtcctggggatgctgttgttaatgtttacataaac
catgagaagaagtttgcttttgtggagatgcgatctgttgaagaggcaagcaacgcaatg
tctttggatgggattatatttgagggagctccagtgaaggtgagaagacctagtgactat
aacccatctctagctgcaactctcggtccaagccagcccagtcccaatctaaacttagct
gctgttggtctgactccaggtgcttctggtgggcttgaaggtccagatcgtatatttgtt
ggtggacttccatattacttcaccgaggcacaagtcagggagttgttggagtcctttggt
gccctgaagggatttgatcttgtaaaagatcgagaaactgggaactctaaaggatacgcc
ttttgtgtgtaccaagatctctccgttacggatattgcgtgcgctgccctaaatggtatc
aaaatgggtgataagactcttactgtgagacgtgcaaaccagggaacaatgcaaccgaaa
cctgaacaagagagtgtattgttgcatgcgcaacagcagattgctttacagaggattatg
cttcagccgggcgcagcggccacaacagtcgtatgtctgactcaagttgttgccgaggat
gagctaagagacgacgtggagtatgaagaaataatggacgacatgaaacaagaaggcgaa
aagtttggtgcattgaccaatgttgtgattccgcgtcccagccccaacggtgagccagtg
ccaggccttggcaaggtgttcttgaagtatgccgatactgagagtgcatcgagggcaaga
aacgggatgaatggtaggaaatttggaggaaacgaagtggttgctgtgttttacccagaa
gacaagtttgaacagggagattatggagcctga

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