KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10025146mg
Entry
EUTSA_v10025146mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03082  ATP-dependent chromatin remodeling
eus03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    EUTSA_v10025146mg
   03083 Polycomb repressive complex
    EUTSA_v10025146mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10025146mg
Enzymes [BR:eus01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     EUTSA_v10025146mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     EUTSA_v10025146mg
   HDAC complexes
    Sin3A-HDAC complex
     EUTSA_v10025146mg
    BRAF-HDAC complex
     EUTSA_v10025146mg
    REST complex
     EUTSA_v10025146mg
    SHIP complex
     EUTSA_v10025146mg
    MiDAC complex
     EUTSA_v10025146mg
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     EUTSA_v10025146mg
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    EUTSA_v10025146mg
  Chromatin remodeling factors
   NuRD complex
    EUTSA_v10025146mg
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18028175
NCBI-ProteinID: XP_006411595
UniProt: V4MK74
LinkDB
Position
Unknown
AA seq 457 aa
MDTGGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VLKPFPARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFARP
MPGALLKCEASGFCYVNDIVLAILELLKQHEWRTAFYSTDRVTTVSFHKFGDYFPGTGHI
QDIGYGNGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRL
GCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPEH
EYYEYFGPDYTLHVAPSNMENKNSRQMLEVIRNDLLHNLSKLQHAPSVPFQERPPETEAP
EVDEDQEDGDKRWDPDSDMDVDDDRKPIPNRVKREAVEPDAKDKDGLKGVMERGKGFEAG
MDESGSTKVTGVNTVGMEEASVKMEEEGTSKAGVDQG
NT seq 1374 nt   +upstreamnt  +downstreamnt
atggatactggcggcaattcgctggcgtccggacctgacggcgtgaagaggaaagtttgc
tatttctatgacccagaagttgggaattactactacggccaaggtcaccccatgaagccc
caccgcattcgcatgacccatgccctacttgctcattacggtctcctccagcatatgcag
gttcttaagcccttccctgcccgcgaccgtgatctctgccgcttccacgccgacgactac
gtctcctttctccgcagcattacccctgaaacccagcaagatcagattcgccaactcaag
cgcttcaatgttggtgaagattgtcccgtctttgacggcctttattcttttgccagacct
atgccgggggctctgttgaagtgcgaggcctctggcttctgctacgtcaatgacatcgtc
ctagctatcctagagctccttaagcagcatgagtggaggaccgcgttttattctactgac
agggtcacgactgtctcattccataaatttggggattactttcccggtacaggtcatata
caggatattggttatggaaatggaaagtactattctcttaatgtaccactggatgatgga
atcgatgatgagagctatcatctgttattcaagccgatcatgggcaaagtgatggaagtt
ttccgaccaggtgccgtggtattgcaatgcggtgctgattcattgtctggcgataggctg
ggttgctttaatctttcgatcaaaggtcatgctgagtgtgtcaaatttatgagatcgttc
aatgttcccctactgctcttgggtggtggtggttacactatccgcaatgttgcccgttgc
tggtgctacgagactggagttgcacttggagttgaagttgatgacaagatgccagagcat
gaatattatgagtacttcggtccagactatacacttcacgttgctccaagtaacatggaa
aataagaattctcgccagatgcttgaagtgattcgtaatgaccttctccacaatctatct
aagcttcagcatgctccaagtgtgccatttcaggaaaggccaccagaaacagaggctccc
gaggtagatgaagaccaagaagatggagataaaagatgggatccggattctgatatggat
gtagatgatgaccgtaaacctataccaaacagagtgaaaagagaagctgttgaacctgat
gcaaaggacaaggatggactgaaaggagtaatggagcgtggcaaaggttttgaggcgggt
atggatgagagtggaagcacaaaggttacaggagtaaacacagttggaatggaggaagca
agtgtgaaaatggaggaggaaggaacaagcaaggctggggtggatcagggttga

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