Eutrema salsugineum (saltwater cress): EUTSA_v10025149mg
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Entry
EUTSA_v10025149mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EUTSA_v10025149mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10025149mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
EUTSA_v10025149mg
Prokaryotic type
Archaeal type
TFE
EUTSA_v10025149mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
Rrf2
zf_C2H2_10
Dimerisation
Motif
Other DBs
NCBI-GeneID:
18029880
NCBI-ProteinID:
XP_006413855
UniProt:
V4MQC7
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MDISVPVQRTVVLKLFTRLVRLVARVSYDQYTTRRDDQPISARTDDRGIAVVVLDSLTRR
QWVREEDLAKDLRINAKLLRKILRHFEEQKLVKRHHRKEKNAKIYSGAVAATTDGRAEDK
VKLQTYSYCCLDYQQIYDIVRCKLCRIKKKLKDEQEDKNTVQEYGCPKCQRKYNALDALR
LLSMEDDSFHCEKCNGELVVECKKLTSKDVVNGDGYAKKLQMVEVLQDLMGQIHKVEDLP
FPDYESYPEWEARAARAAHENGGLNPNDPSRSQGGYGSTSMQFLGETKVEVNLGEGKEDV
KSEGGDSSQKVFPSWMIKEGMNLTDEQRGEMRHEANTDDGVSGGSVKISDESAMGNGDDK
DLKDEYIKAYYAALLKQQEVAEKLNQQESAGVLTTPDIELASTTSSDRQVGMKSKREEED
EEDVEWEEEAPVAANGDYKVDLNVQADDEKEEEDDVEWEEG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcagtcccggtgcagagaaccgttgtgctcaagctatttaccaggttggtg
aggcttgtagcaagggtttcctatgatcagtataccacgagaagagatgatcagccgata
tctgcaagaactgacgacagagggattgccgttgtggtgctggactcgcttacgaggcgg
caatgggttagagaagaagatttggcaaaagacttgaggataaatgccaagctactccgg
aaaatattaagacactttgaagaacaaaaattggtcaagcgtcaccaccggaaagagaag
aatgcaaagatatatagtggtgcagtggctgctacaactgatggccgagcagaggacaaa
gttaagctccaaacgtactcatactgctgtcttgattatcaacagatatatgatattgtt
cggtgtaagctgtgccggattaaaaaaaaactcaaagatgaacaagaagataagaatact
gttcaagagtatggctgtcctaaatgccaaaggaaatataatgcactggatgccctgaga
ttactttctatggaagacgattcttttcattgtgagaaatgcaatggtgaacttgttgtg
gaatgtaaaaagctaacttccaaagatgtagtaaatggagatggctatgcaaagaaactt
cagatggtggaggtcttgcaggatctgatgggtcaaatacataaagtagaagacctaccg
tttcctgactatgaatcttatccggaatgggaggctcgtgcggctagggctgctcatgaa
aatggtggtctgaaccctaacgatccttcgaggtcacagggtgggtatggttcaacatcg
atgcaatttctcggagagacaaaggttgaggttaaccttggtgaaggaaaagaagatgtt
aaatctgaaggtggagattctagtcagaaagttttcccttcatggatgatcaaagaagga
atgaatctgacggatgaacaaagaggagagatgagacatgaagcaaacactgatgatggt
gtctctggaggatcagtcaaaatttcagatgaatcagccatgggaaatggcgatgataag
gatctgaaggatgaatatatcaaagcttactacgccgctctactgaagcagcaagaggta
gctgaaaagctgaatcagcaagaatctgcaggggtattaaccactcctgacattgagttg
gcttctacaacatcctcagatcgtcaggttggtatgaagtccaaacgtgaagaggaagat
gaagaagatgtggaatgggaagaagaggctcctgttgcagcaaatggagactacaaggtg
gacttaaatgtgcaagcagatgatgaaaaagaagaagaagacgacgtcgagtgggaagaa
gggtga
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