KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10025149mg
Entry
EUTSA_v10025149mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    EUTSA_v10025149mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eus03021]
    EUTSA_v10025149mg
Transcription machinery [BR:eus03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     EUTSA_v10025149mg
 Prokaryotic type
  Archaeal type
    TFE
     EUTSA_v10025149mg
SSDB
Motif
Pfam: TFIIE_alpha Rrf2 zf_C2H2_10 Dimerisation
Other DBs
NCBI-GeneID: 18029880
NCBI-ProteinID: XP_006413855
UniProt: V4MQC7
LinkDB
Position
Unknown
AA seq 461 aa
MDISVPVQRTVVLKLFTRLVRLVARVSYDQYTTRRDDQPISARTDDRGIAVVVLDSLTRR
QWVREEDLAKDLRINAKLLRKILRHFEEQKLVKRHHRKEKNAKIYSGAVAATTDGRAEDK
VKLQTYSYCCLDYQQIYDIVRCKLCRIKKKLKDEQEDKNTVQEYGCPKCQRKYNALDALR
LLSMEDDSFHCEKCNGELVVECKKLTSKDVVNGDGYAKKLQMVEVLQDLMGQIHKVEDLP
FPDYESYPEWEARAARAAHENGGLNPNDPSRSQGGYGSTSMQFLGETKVEVNLGEGKEDV
KSEGGDSSQKVFPSWMIKEGMNLTDEQRGEMRHEANTDDGVSGGSVKISDESAMGNGDDK
DLKDEYIKAYYAALLKQQEVAEKLNQQESAGVLTTPDIELASTTSSDRQVGMKSKREEED
EEDVEWEEEAPVAANGDYKVDLNVQADDEKEEEDDVEWEEG
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggatatatcagtcccggtgcagagaaccgttgtgctcaagctatttaccaggttggtg
aggcttgtagcaagggtttcctatgatcagtataccacgagaagagatgatcagccgata
tctgcaagaactgacgacagagggattgccgttgtggtgctggactcgcttacgaggcgg
caatgggttagagaagaagatttggcaaaagacttgaggataaatgccaagctactccgg
aaaatattaagacactttgaagaacaaaaattggtcaagcgtcaccaccggaaagagaag
aatgcaaagatatatagtggtgcagtggctgctacaactgatggccgagcagaggacaaa
gttaagctccaaacgtactcatactgctgtcttgattatcaacagatatatgatattgtt
cggtgtaagctgtgccggattaaaaaaaaactcaaagatgaacaagaagataagaatact
gttcaagagtatggctgtcctaaatgccaaaggaaatataatgcactggatgccctgaga
ttactttctatggaagacgattcttttcattgtgagaaatgcaatggtgaacttgttgtg
gaatgtaaaaagctaacttccaaagatgtagtaaatggagatggctatgcaaagaaactt
cagatggtggaggtcttgcaggatctgatgggtcaaatacataaagtagaagacctaccg
tttcctgactatgaatcttatccggaatgggaggctcgtgcggctagggctgctcatgaa
aatggtggtctgaaccctaacgatccttcgaggtcacagggtgggtatggttcaacatcg
atgcaatttctcggagagacaaaggttgaggttaaccttggtgaaggaaaagaagatgtt
aaatctgaaggtggagattctagtcagaaagttttcccttcatggatgatcaaagaagga
atgaatctgacggatgaacaaagaggagagatgagacatgaagcaaacactgatgatggt
gtctctggaggatcagtcaaaatttcagatgaatcagccatgggaaatggcgatgataag
gatctgaaggatgaatatatcaaagcttactacgccgctctactgaagcagcaagaggta
gctgaaaagctgaatcagcaagaatctgcaggggtattaaccactcctgacattgagttg
gcttctacaacatcctcagatcgtcaggttggtatgaagtccaaacgtgaagaggaagat
gaagaagatgtggaatgggaagaagaggctcctgttgcagcaaatggagactacaaggtg
gacttaaatgtgcaagcagatgatgaaaaagaagaagaagacgacgtcgagtgggaagaa
gggtga

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