Eutrema salsugineum (saltwater cress): EUTSA_v10025176mg
Help
Entry
EUTSA_v10025176mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10025176mg
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10025176mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
Other 90S particles
EUTSA_v10025176mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EUTSA_v10025176mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
eIF2A
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
PROPPIN
Beta-prop_IP5PC_F
VID27
Motif
Other DBs
NCBI-GeneID:
18028685
NCBI-ProteinID:
XP_006412953
UniProt:
V4P4J6
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MKVKVISRSVDEFTRERSQDLQRVFHNFDPSLRPMEKAVEYKRALNAAKLDKIHAKPFMH
AMDGHRDGISCMAKNPNYLKDIFSGSMDGDIRLWDLATRRTVCEFPGHQGAVRGLTVSTD
GNVLVSCGTDCTVRLWNVPRPSLQDFNISSENSIEPSAVYVWKNAFWGVDHQYGGELFAT
AGAQLDIWNHNRSQPVQSLQWGTDSVISVRFNPGEPDLLATSASDRSITIYDLRMSSAAK
KIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHKDHVSAVMDIDYSPT
GREFITGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNVRLWK
SKASEQLGVLLPREQRKHEYDESVKNRYKHLPEVKRIVRHKHVPKPIFKAIGIIRAKNDS
KRRKDARRKAHSAPGTVITVPLRKRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaaggttatatcgagatcagttgatgaattcactcgagaaagaagtcaggat
cttcagcgggtctttcacaacttcgacccaagtctccgacctatggagaaggcagtggaa
tacaagagggctcttaatgctgccaaattagataagatacatgcaaagccgtttatgcat
gccatggatgggcatcgcgatggcatctcatgtatggcgaagaacccgaattacctgaag
gatatcttctcgggttctatggatggagatattcgcctttgggatcttgctacgaggcgc
acagtttgcgaatttcctggtcatcaaggtgccgtgcgtggtcttacagtctcaaccgat
ggcaatgtattggtttcatgcggaactgattgcactgttcgtttgtggaatgttcctcgt
ccttcgcttcaagattttaacatttcatctgaaaattctattgagccatctgcggtctat
gtctggaagaatgctttctggggtgttgatcatcagtatggaggggaactttttgctacg
gccggagctcaattggatatatggaatcataataggtctcagccagttcaaagtctccag
tggggaactgactctgtaatatctgtccggtttaatcctggagagcctgatttattggca
acatctgctagtgatcgcagcataaccatttatgatctccgcatgtcttctgcagcaaag
aaaattatcatgatgacgaaaacaaattcaatcgcatggaaccctatggagcctatgaac
ctgacagctgctaatgaagatggcagctgctatagctttgatggtagaaagctggacgaa
gccaagtgtgtgcataaagatcatgtttctgcggtgatggatattgattattcaccaact
ggtcgtgaatttattacgggatcttatgatcgatcagtgagaatcttcccctacaatgga
ggacacagcagggaaatctaccatacaaagaggatgcagagagtattctgtgtcaagtat
agttgtgatgcgacctatgttatatcaggcagtgatgacactaatgtcaggctatggaag
tccaaagcatcagagcaattgggagttcttcttccaagggaacagaggaagcatgagtac
gacgagtctgtgaagaatcgatacaagcatcttcctgaggtcaagcgcattgtcagacac
aagcacgtgccgaaacctatattcaaagcaatagggataatccgagccaagaacgattcg
aagaggaggaaagatgcccgaaggaaagctcacagtgctccaggaaccgttatcactgta
cctctgcgcaaaagaaggatcatcaaagaagtggagtga
DBGET
integrated database retrieval system