KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10025548mg
Entry
EUTSA_v10025548mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K14305  nuclear pore complex protein Nup43
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    EUTSA_v10025548mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eus03019]
    EUTSA_v10025548mg
   03036 Chromosome and associated proteins [BR:eus03036]
    EUTSA_v10025548mg
Messenger RNA biogenesis [BR:eus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     EUTSA_v10025548mg
Chromosome and associated proteins [BR:eus03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    EUTSA_v10025548mg
SSDB
Motif
Pfam: WD40 WDR55 Beta-prop_EIPR1 Beta-prop_HPS5 WD40_Prp19 ANAPC4_WD40
Other DBs
NCBI-GeneID: 18030865
NCBI-ProteinID: XP_006412662
UniProt: V4LU24
LinkDB
Position
Unknown
AA seq 317 aa
MEMQDSFQVHRIPQSKYVDGVRWLPQASALNRFFAAAFHDPDCESSSIEIQSLDPNPRGN
PSNNPSVDSLSAWTSPSRVSSLEVAGSSGGGGSFKPMVSAATSSGSLHVLMADLVEGAAI
EEVYAAEGERFHVGRVEGVDWREAGECVTVGDDGRVNVVTVSNGEGLRYRRVFDGNGLVA
YRAVKWASPTEFVTGGYGFGLQLWDQRKPGEAVSQLKGNWFQGKTSAVVHSIDIHPSRKH
TCIAGGSSGTIFAWDLRWPKQPIVLSGVGSSESVNNPLSESEMASLVSSSKGKNRSSFWL
NLVPLTVLTSTDKIHRM
NT seq 954 nt   +upstreamnt  +downstreamnt
atggagatgcaggattcgttccaggttcataggataccgcaatcgaagtacgtagacgga
gttagatggctcccacaagcttccgctttgaatcgtttcttcgcagcagctttccatgac
ccggactgtgaatcttcgtcaatcgagatccaatcgcttgacccgaaccctagggggaat
ccgagtaataacccatcagtagattcgttatctgcatggacttcaccttctcgcgtttcg
tccctggaagtcgccggaagcagcggcggaggcggctccttcaaaccaatggtttcggca
gccacgtcttccggttcgctccacgttttgatggctgatctggtggaaggagctgcgatt
gaggaggtttacgcggcggagggagagaggtttcacgtgggacgcgtggagggtgtggat
tggagggaggctggagaatgtgtgacggtcggtgatgatgggagagtgaatgtagtgacg
gtttcgaatggtgaagggctaagatacagaagggtctttgacgggaacggtctggtggct
tatagagccgtgaaatgggcgtctccgactgagtttgtcactggaggatacggttttggt
ctgcaattgtgggatcagaggaagcctggtgaagctgtctcgcagctcaaaggaaactgg
tttcaaggcaaaacttctgcagttgtacactccattgacattcatccatccagaaagcac
acttgcattgcaggaggttcttcaggtactatttttgcttgggatcttcggtggccaaag
caacccatcgttctttctggtgttggatcaagtgagagtgtaaacaatcctctgtctgaa
agtgagatggcatccttggtatcatcgagcaaggggaagaaccgatcgagcttctggctg
aaccttgtgccattaacagttttgacatcgacagacaaaatccacaggatgtga

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