Eutrema salsugineum (saltwater cress): EUTSA_v10027030mg
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Entry
EUTSA_v10027030mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Module
eus_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10027030mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
EUTSA_v10027030mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
18030974
NCBI-ProteinID:
XP_006414139
UniProt:
V4MJK5
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
VRNIDKSSVLIVNVHSFGARANDHRDHTKAFEAAWDKACKSSSSSVDLIIPRGEFSVGPL
RFSGPCTNVSNLTVRVKASTDLSKYRSGGGWIEFRWINGLTLTGGGTFDGQGAVAWPFNN
CTTDSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHMALVECRDFKGTRLNITAPSDSPN
TDGIHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEK
DVKGLVVRDCKMSGTTNGIRIKTWANSPGLSAATNMTFQNIVMKNVTNPIIIDQSYCPFS
SCTSNVPSKVKLSDIYFKNIRGTSSSRVAVQLHCSRGIPCKKVFLENVHLYLSSSGGGIG
ENQSRNRGSEAVSSSCRYVRARYIGTQIPPPCH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtccgtaacattgataaaagctctgtccttattgttaatgtccatagttttggtgctcga
gctaacgaccatagagatcacaccaaggcatttgaagcagcatgggacaaggcatgtaaa
tcatcttcaagctctgtagatcttataatcccaagaggtgaattctctgttggtcctctc
agattctctggtccttgcactaacgtatccaatctcactgtccgagttaaggcatcaact
gatctgtcaaagtatagatcaggtggaggttggattgagtttagatggatcaacggttta
actcttaccggaggtggaacatttgacggtcaaggcgccgtagcttggccgtttaataac
tgtactaccgattctaactgcaaactcctcccaacaagcttgaagtttgtggggatgaac
agaacagtggtaagaaggataagctcagtgaacagcaagttctttcacatggcattagtt
gagtgcagagacttcaaaggcacaagactcaacatcactgctccttctgatagtccaaat
acagatggtattcatatcgaacgcagctccaatgtctatttctcgcgttcacatatagcc
actggagatgattgtgtctctataggacaaggaaattctcagatcacaatcactagtatc
aaatgtggaccaggacatggtatcagcgttgggagtttaggaagatatccaaatgagaaa
gatgtgaaggggctggtggtgagggattgcaagatgagcggtacaacgaatgggataagg
atcaaaacttgggctaattctcctggtcttagtgcagctaccaacatgacttttcagaac
attgttatgaagaatgtgactaatccaatcatcattgatcagtcttattgtcctttctct
tcttgcacttcaaatgtaccgtcgaaggtgaagctgagtgatatatacttcaagaacata
agaggaacatcatcttcgagggtggctgtgcagctacattgtagcagaggaattccatgt
aagaaagtgttcttagagaatgttcatctctatctttcttcttctggtggaggaattgga
gaaaaccagagcagaaacagaggaagtgaagctgtctcttcttcttgtagatacgttaga
gctagatacattgggactcaaatcccacccccatgtcactaa
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