Eutrema salsugineum (saltwater cress): EUTSA_v10027081mg
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Entry
EUTSA_v10027081mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EUTSA_v10027081mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EUTSA_v10027081mg
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Paralog
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
18030081
NCBI-ProteinID:
XP_006411832
UniProt:
V4LRQ3
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MKNRAMGIKAGRVMIHIFVLIFLLQYVHSRTSRNKLNIAKAGQKLVSLVTLKKDIPNLVV
VDNGIIQVTFSNPSGLITGVKYNGFDNVLNDQIKNRGYWDVVWYEPGQKPLTDFLIGEKF
DIINQTSEHVEVSFSRTWKISQRGSVAPLNVDKRYIIRSGVSGVHMYAVLERLKGWPEVN
MDQTRIVFKLNTTKFDFMALSDSRQKIMPSEEDRDVTNGNASPLAYKEAVRLIKPKNYIL
KGQVDDKYMYSMEDKDNKVHGWISSDPRVGLWMITPSDKFRVCGPVKQDLTSHLGPTILS
MFTSTHYVGKDMDTTYTSKEPWKKVFGPVFVYLNSATSPNLLWTDAKRQMVAEVQSWPYD
FVKSVDYPLRHQRGTVKGQFFVMDRYISKSKLFGESAFVGLAIPGEVGSWQTENKGYQFW
TRADKVGMFTITNVRPGKYSLYAWVSGFIGDYKYERDITITPGMEINVGTIVYEAPRNGP
TLWEIGEPDRTAAEFYIPDPDPSLLTKLYLNSSNPSQDKFRQYGLWDRYSVLYPRNDLIY
IAGVNDYKKDWFYAHVTRDAGNGTFHETTWQIVFHLKTVNQTGNYTLRMALAAATTADLF
VRANEANSEPIFTTGFIGRDNAIARHGVHGLYRLYNINIQGKLLRVGNNTILLTQNRITS
SVIGVMYDYLRLEGPSGV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagagctatgggaataaaagcgggtcgggttatgattcatatttttgttctg
attttccttcttcaatatgttcattcccgaacgtcgcgaaacaaattaaatatcgcaaaa
gcgggacaaaagcttgtatctctagttacgcttaagaaagatatccctaacctagtggtc
gttgataatggtattatacaagtcaccttctcgaatccatcaggcttaataactggagtc
aagtacaatggctttgacaatgtgttgaacgaccaaattaagaatcgcgggtattgggac
gtagtatggtatgaaccaggacaaaagccgttgacagattttttaattggagaaaaattc
gatataataaatcaaacaagtgagcatgtcgaagtttcattttcaagaacatggaagatc
tctcaacgtggctcggtagccccattaaacgtagataaaagatatataattcgaagtggt
gtgtctggagtacatatgtacgctgtgttagagaggttaaaaggttggccggaagtgaac
atggaccaaaccaggatcgtcttcaagcttaacacaacaaaattcgatttcatggcttta
tcagatagtcgacagaaaatcatgccttctgaagaagatcgagatgtcaccaatggtaat
gctagtccattggcttacaaagaagctgttcgattgataaaaccaaaaaattatatactt
aaagggcaggttgacgataagtatatgtactcaatggaagacaaagacaacaaagtgcat
ggttggatttcgtctgacccacgtgtcggtttgtggatgataactcccagcgataagttc
cgtgtttgtgggcccgtcaaacaagatctcacttctcatctaggacccaccatcctttcc
atgtttacaagtacacattacgtgggaaaagatatggacacaacctatacaagcaaggag
ccgtggaagaaggtgtttggtcctgtctttgtttatctcaactctgccacctctcctaat
ctcctatggactgatgctaaacgacagatggttgccgaggtccaaagctggccttatgat
ttcgtgaagtcagtagattaccctcttcgccaccaaagaggaacagtcaagggtcaattc
tttgtcatggacagatacataagcaagtcgaagttatttggggaatctgcttttgtgggt
ttagcaatacctggtgaagttggttcttggcaaaccgaaaacaagggatatcaattttgg
acacgagcagacaaagtggggatgttcacaataacgaatgtgagaccagggaagtatagt
ctctacgcatgggtttctggatttattggtgactataaatacgagcgtgacattaccatc
acaccaggtatggagataaacgtaggaaccattgtgtacgaggcgccaagaaacggtccg
acactgtgggagatcggagaaccggatcggaccgccgcagagttctatatccctgatccg
gacccaagccttttgaccaaactctatcttaattcctcaaatccttcccaagacaagttt
agacaatacggtttatgggatcgttacagtgttttgtatcctcgaaacgatcttatttat
attgctggagtgaatgactataaaaaagactggttctatgcacatgtcaccagagatgct
ggaaatgggacatttcacgaaacaacatggcaaattgtgtttcatttaaaaacagtgaat
caaacgggaaactacacacttcgaatggctttggctgcagccacgactgcggatttgttt
gttcgggctaacgaagctaactccgaacctattttcacgactgggtttataggtcgagat
aacgcgattgctaggcatggtgttcatgggctgtacaggttgtacaatatcaatattcaa
ggaaaattgcttagggttggtaataatacgattttgcttactcaaaatcggatcactagt
tcggttataggtgttatgtatgattatcttcgtttggaaggtccttctggagtttga
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