Eutrema salsugineum (saltwater cress): EUTSA_v10027627mg
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Entry
EUTSA_v10027627mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EUTSA_v10027627mg
03460 Fanconi anemia pathway
EUTSA_v10027627mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10027627mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10027627mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10027627mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
EUTSA_v10027627mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
EUTSA_v10027627mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
EUTSA_v10027627mg
FA (Fanconi anemia) pathway
Downstream FA components
EUTSA_v10027627mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
18022750
NCBI-ProteinID:
XP_006405906
UniProt:
V4LU44
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MSTWQLLSDPGGDNFRWEVGGRIRQSDNSDSTTSTKTIDSTAPPLPSMADLLLRGCSKLI
EREEAMPTMFTTGLGKSVSLKDSSISRAKSILADSDNNVLPRESGFGVPNTLFQTASNKK
VNVSSAGLAKARALLGLQEDDLNGFNHANCSSSSQEKHEWSGLKSHDATSVQHPSVTPGR
QYESHVSGRRSDMLTPASKVPQTKFQTAGGRSLSVSVEALKRARSLLGDPELGNFFDDVA
ADDQFVTPQKDERSGDIANTGYTAHKGTTSNKHTSNSFISPLQTSSKQFRSVRLENISSG
GNLIKKFDAAVDETDCALNITKPATHGLSNDRPLASDMAVNNPTKKGFIPRAKQFGRPAD
QPLVDITNRSERTYANNKQDSSQKKRLGKTVSVPPFKKPRTSSFKPPLMNNAQHASNGLS
VKLCDTHYSKKVLSTRFKERSPRVYIKDYFGMHPTATSKMVYVPDHVRRIKSSNADRYVF
CDEPSSSVVGAETFHQILAECGASLQHASRKWVTNHYRWIVWKLACYETYYPAKCRRNFL
TIPNVLEELKYRYDREANHGHCSAIKRILSGDAPASSMMVLCISAINPKTDDDYQETHGS
YSGSNVKIELTDGWYSMNAALDVMLTKQLNAGKLFIGQKLRILGAGLSGWATPTSPLEAR
TSNTIFLLLNINGTYRAHWADRLGFCKEVSVPLSLNCIKSNGGPVPKTIAGITRIYPILY
KERLGERKAIVRSERMESRMIELHNQRRSALVEGLICEYERGINGVHSQNDTDSEGAKLY
TLLETAAEPELLMADMSMEQLTSFAAYKSKFEAARQKKMEKSVTEALEDAGLGERDVTPF
MRVRLVGLTSLSSEGKHNPKEGIVTIWDPTDTQITELTEGKIYIMKGLAPINSDSQTLYL
HARGSTSGWQPLSPKASESFQPFFNPRKPISLPNLGEIPLSSEFDIAAYVVYVGNVYTDV
EQKKQWVFVTDGSFQRLHSGEISYSLFAISFSTPSMDDFPITLFSQNLVGSVVGFCNLLK
RAKDTKNDMWVGEATENSDYSVNAEDAYSSHLKTSCASIEKWAKLSASNSVRSLQ
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagctactttccgatcccggcggcgataatttccggtgggaagtcggt
ggccggattcgtcagtctgacaactccgattctactacatccacgaaaacgatcgactcc
acagctcctcctctaccttctatggctgatctcttgctccgaggttgctcgaagcttata
gaacgggaggaagcgatgccaacaatgtttacgactggtctaggcaagtctgtgtctcta
aaagactcttcgatttccagagccaaatcgattttagcagattcagacaacaacgttctt
cccagggagagtgggtttggtgttcccaacactttattccagacagcttctaacaagaag
gttaatgtatcttctgccggtctggcaaaagccagagcattgttaggactacaagaagat
gatttgaatgggtttaaccatgcgaactgttcgtcttcttcccaagagaaacatgagtgg
tctgggttgaaaagtcatgatgctacatcggttcagcatccttcagtaactccaggtaga
caatatgagagtcatgtatctgggaggagatctgatatgttgactccagcttcaaaggtg
cctcaaacaaagtttcagactgctggtggaagatcattgtcagtgtcggttgaggcattg
aaacgtgctagaagccttcttggagaccctgagttagggaatttctttgatgatgtagca
gcagatgatcagtttgttacgccacagaaagatgaaaggtcaggagatattgccaacaca
ggctatactgctcataaaggaacgacaagcaacaagcatacttcaaatagttttatatct
cctcttcagacatcgtcaaagcaatttagatcagtcagattggagaacatatcttcaggg
ggtaatttgatcaagaaatttgatgcggctgttgatgagacagactgtgctctgaatata
actaaacctgctacacatggactatcaaatgacaggcccttagcatcagatatggcagtg
aataatcccacgaaaaagggtttcattccaagagctaaacaatttggaaggccagctgac
cagccacttgttgatataacaaatcgcagtgaaagaacttacgcaaacaataaacaagac
agtagccaaaagaaaagactgggaaagacggtctctgttcctccgtttaaaaagccaagg
acttcttcctttaaacctcctttaatgaacaatgctcagcatgcttcaaatggtttgtct
gtcaaattatgtgatactcattattccaaaaaagtgctttctacaagatttaaagaaagg
tctccaagagtatatatcaaggattattttggaatgcatccaacagctacgagcaagatg
gtttatgtgccagatcatgtcagaaggatcaaatcaagtaatgcagatagatatgtattc
tgtgacgagccttcctcaagcgtggttggagctgaaacttttcatcaaattctggcagag
tgtggtgcttccttacaacatgcatctagaaagtgggtcaccaatcactacaggtggata
gtctggaaacttgcatgctacgagacatactacccagccaaatgcagaagaaactttctg
acaattcctaatgttcttgaggaattaaaatacaggtatgacagagaggccaatcatggt
cattgctctgcaatcaagaggattctgagtggtgatgctccagcttcttcaatgatggtg
ctctgcatatcagctattaacccaaagaccgatgatgattatcaggaaacgcatggttct
tacagtggcagcaatgtcaaaatagaactcactgatgggtggtactcgatgaatgctgct
ctggatgtcatgctgacaaaacaactgaatgctggaaaattgtttatcgggcagaagctt
cgaatccttggggcaggactttctggctgggctaccccaacatcacctcttgaggcaagg
acttcaaatacgatttttttgttgttgaatattaatgggacatacagagctcactgggcg
gaccgactaggattctgtaaagaagttagtgtccctttgtctctcaattgtatcaagagc
aatggtggtccagttcctaaaacgatagctggaatcacacgaatataccctattctgtac
aaggaaaggttaggtgaaaggaaggcaatagttcgatcagagaggatggaaagtagaatg
atcgagttgcataaccagcggcgctcagctcttgttgagggtcttatttgtgagtacgag
agaggaatcaatggtgtccacagccagaacgacactgacagcgaaggagccaagctctat
acgctgttagagactgctgctgaacctgaactcctaatggcggatatgagtatggagcag
ttgacgtcttttgcagcatataaatcaaagtttgaggcagctaggcaaaaaaagatggaa
aaatcagtgacagaagctctggaagacgctggcttaggtgaaagggatgtcaccccattc
atgagggttaggcttgttggactgacaagcttgagttctgaaggaaaacacaatccaaaa
gaaggcattgtaacaatctgggatcccacggatacacagataaccgagttgacagagggg
aagatatacataatgaaagggctggctccaataaactcagattcacaaacactctactta
catgccagagggtctacctcaggatggcagcctttgtctccaaaagcttctgaaagtttt
cagcccttttttaatcctcgtaaaccgatctctttgccaaatcttggtgaaattcctctt
tcaagtgaatttgatatcgcggcgtacgtggtatatgttggaaatgtatacacggatgtt
gaacagaagaagcagtgggtgtttgtgacagatggatcctttcaacgattacattcaggg
gaaatctcatatagtctttttgctataagcttcagcaccccatccatggatgacttcccc
attaccctctttagtcaaaatcttgtcggatctgtggtaggattctgcaatctattaaaa
agagcaaaggatacaaaaaacgatatgtgggttggtgaggcgacagagaactcggactac
tccgtcaacgcagaagatgcttactcttctcacctcaaaaccagttgtgcctctatcgaa
aaatgggctaagctctctgcttctaactctgttcgttctcttcaatga
DBGET
integrated database retrieval system