Eutrema salsugineum (saltwater cress): EUTSA_v10027696mg
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Entry
EUTSA_v10027696mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11883
RNA-binding protein NOB1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EUTSA_v10027696mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10027696mg
03051 Proteasome [BR:
eus03051
]
EUTSA_v10027696mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
EUTSA_v10027696mg
Proteasome [BR:
eus03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
EUTSA_v10027696mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR
Motif
Other DBs
NCBI-GeneID:
18023078
NCBI-ProteinID:
XP_006405384
UniProt:
V4LWD0
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MEPNPTSMWSSIVKKDPPSKPPATGGAPAAIIGMVGSCKSTKGISMAVVDANAVIQGGQS
LNNFADKFVTVPEVLSEIRDPNSRRFLDFIIPFTIDPMEPSPESLTKVIKFARATGDLQS
LSDVDLKLIALTYTLEAQVHGTKNLRDVPPPIQTVTVKRLAEKDLPGWGSNVANLEEWEA
LENENEEKSNSNSKILPLKDLNMNIIPSDITSEIGSVVSHTENQEVDDQEGERRHRRYPP
KKTEVKLEGKMVVEGIDASLGEHDDEDSGDWRPAVSSSTHRKFLRRKAKWEHYNALAEQE
MQQDQEADKAGKLTEDTTDQMSEDADEKCAKDIGKNDEDLSSILKDMRLEEDSAKALQEG
LGETNAEATLSNDEDDIDHDVDVEGIDVACEASSMADDGSSEQSWSLRALSESSVACITG
DFAMQNVILQMGLRLLAPGGMQIRQLNRWILKCHACYTVTPETWRIFCPKCGNGGTLRKV
AVTIGENGTVVAARKPRVTLRGTKFSIPMPKSGRDAITKNLVLREDQLPQKFLHPKTKKK
ASKPGDEYFISDDVFMNHHSDRKAPLQPPVRKAMAVFSQKRNPNDNHYSRSMH
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaatccaacctcgatgtggagttccatagtgaagaaagatcctccttcgaag
cctccggccaccggcggagctccggcggcgattatcggaatggtcggaagctgcaaatcc
acaaagggaatttctatggctgttgttgacgccaacgccgtaatccaaggaggccagagc
ttaaacaacttcgccgacaaattcgtaaccgtccctgaagttctctccgagattcgtgac
cctaattctcgccgttttctcgactttatcatccctttcactatcgaccccatggaacct
tctcctgaatctctcactaaagttattaaatttgctagagctactggtgatttgcagagt
ctttctgacgttgatctcaagctcattgctttgacatacacgctcgaggctcaggttcat
gggaccaaaaacctcagagatgttcctccgccgattcaaactgttacggtaaagagatta
gctgagaaggatttacctggttggggctccaatgtggctaacttggaggagtgggaggca
ctagaaaacgagaacgaggaaaaatccaactctaactccaaaattcttccgctcaaggac
cttaacatgaatatcatcccttcagacattacttctgagattggttctgttgtgtctcat
actgagaatcaagaagtggatgatcaagaaggggagaggaggcataggcgatacccaccc
aagaaaacagaggtaaagcttgagggtaagatggtagtggagggaatagatgcatcgctg
ggagaacatgatgatgaagattctggcgactggagacctgcagttagtagcagtactcac
agaaagttccttagaagaaaggcgaagtgggaacattacaatgccttggctgaacaagaa
atgcagcaagatcaggaagctgacaaagctggcaaattgaccgaggacacaaccgaccag
atgtctgaagacgctgatgaaaagtgtgcaaaagatatcggaaagaatgatgaggatctc
tcgtccatcctaaaagatatgaggttggaggaagattcagcaaaggctctccaagaaggg
cttggagaaacgaatgctgaagcaactttgagcaatgatgaggatgatatcgatcatgat
gttgatgttgaggggatcgatgttgcttgtgaggcatcgtcgatggcagatgatggtagc
agcgagcagagttggtcgttgagagccttgtctgagtccagtgtagcttgtataaccggt
gactttgctatgcaaaatgttattcttcaaatgggtttgcgtttgcttgcacccggagga
atgcaaattcgccaactgaacaggtggatcttgaaatgccatgcttgctacacagtaact
cctgaaacttggagaatcttctgtcccaagtgcggtaatggcggcactctacgcaaggta
gccgttacaataggcgagaatggcactgtagtagctgcacgtaaaccacgagtcacactt
cgcgggaccaaattttcgataccaatgcctaaaagtggaagagacgcaatcaccaagaat
ctggttctccgggaagatcaactcccacaaaagtttctccatcccaagaccaagaagaaa
gcaagcaaaccgggagatgagtacttcatatcagacgatgtgttcatgaaccaccacagt
gatagaaaggcaccattgcaacctcctgtgagaaaagctatggcggttttcagccagaaa
cggaaccctaacgacaaccattactctcgttctatgcactga
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