Eutrema salsugineum (saltwater cress): EUTSA_v10028216mg
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Entry
EUTSA_v10028216mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10028216mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10028216mg
Enzymes [BR:
eus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
EUTSA_v10028216mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
EUTSA_v10028216mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-C3HC4_2
DUF1644
Motif
Other DBs
NCBI-GeneID:
18022811
NCBI-ProteinID:
XP_006405877
UniProt:
V4LA72
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
HFDMESASSENDGSGNIRLHKRQRTDNIRSAMVDFDVLDCPICFEPLNIPIFQCDNGHLA
CSSCCAELSDKCPSCTLPIGHIRCRAMESVLESILIPCQNATLGCAKKVSYGKVSTHEKE
CAFSLCSCPVLDCNYTGPYKDLYDHYRFTHLKGDSRQRADSMFKCGVSFSVQMNISDKIL
IKREGVKKLLFVVQCIKEPYGVYVTVSCIAPSASEGGEFSYDIFYKSEDGHIMTYQSPEV
KRIRELSFQIPQNNFMLIPHSFLRGDLLKMNVVIQKVEMF
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
cattttgatatggagtctgcctcaagcgaaaacgatggttcgggcaacattcgcttgcac
aagaggcagcgaacagataatatacgctcggcgatggtggatttcgatgtacttgattgc
cctatctgcttcgagccactcaatattccaatattccagtgtgataatgggcatttggct
tgctcttcttgctgtgccgaactgagtgataaatgcccttcttgtactttgcctatcggc
cacattcgctgcagagcaatggagagtgttcttgaatcgattttgatcccatgccaaaac
gccacgttaggttgcgctaagaaagtgtcttatgggaaagtatcaactcatgaaaaagaa
tgtgctttctctctgtgctcctgccctgtgctagactgcaactacactggaccatacaag
gatctctacgatcactatagatttactcacctgaaaggtgacagtagacaaagagcggat
agtatgttcaagtgtggcgtttcctttagtgtccagatgaacatcagtgataagatatta
atcaaaagggagggtgtgaagaaactactgtttgtggtgcagtgtattaaggagccgtat
ggtgtgtatgtaactgtaagttgcattgcaccatctgcttcagaaggtggagagttctcg
tatgatatcttctacaaaagtgaggatggacacattatgacttaccaatcaccagaggtg
aagaggattcgtgaactgagttttcaaatccctcaaaacaatttcatgttgatccctcac
agtttcttgcgtggtgacttgttgaagatgaatgttgtgattcagaaagtggaaatgttt
tga
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