Eutrema salsugineum (saltwater cress): EUTSA_v10028321mg
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Entry
EUTSA_v10028321mg CDS
T02985
Name
(RefSeq) hypothetical protein
Organism
eus
Eutrema salsugineum (saltwater cress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DNA_ligase_OB_2
FAM76
Motif
Other DBs
NCBI-GeneID:
18022728
NCBI-ProteinID:
XP_006405725
UniProt:
V4M4H6
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MEPSRPSAHHVLMSNARAASAKKKTTTSTSSSSPKKRKLGETRTAGSDKTLVSKPVSDSV
KPKSDSLSTVEDSKSRALIKIAELKNRIGFLKSNPDSFDPESVAWWEKGERVPFMFLCLV
FDLISIENNRKSGRIVITDVLCNMLRTVIATTPENLIATVYLAANEIAPVHEGVELGIVK
SSITKAISEAFNRSDAQVEQLLKTELADLWLLVTESRSSQATVFNFKPKPLTIVKVFDTF
RQIAKESGKDSQRNKKNRITGLLVETTDCETLYLTRLLEGNLRLGFSGKIVLAALGQAAV
YNEEHSKPPPNIKSPLEEAAKIVKRVYSVLPVYDMIVHALLTGGVWNLTKTCNLTLGVPI
RPMLVKVIKSIDQILNNFEGTVFTCEYKYDGERVQIHYMEDGIFEIYSRNGERSTGKYPD
VARAFKRSKKASVKSFILDCEVVAFDREEKKILPFQILSTRARKNVKVSDIKVGVCIFAF
DMLYLNCQQLIQENLDIRREKLYNSFEEDLGYFQFVTALTSSDTDDIEEFFEASVDIGIG
DSVDLVPIGAFHGKGKRAGLFGSFLLACYDKKKEEFQSICKIGTGFSEAELKELYSLLSS
HMIAKPQVGYFVLRSSLGPFQCHICILTEFLLFAMCQTIQHDYRVGDSDKPHVWFEPTEV
WEVKGADLTISPKYGAAIGIVVPDKGISLRFPRLIRVRKDKKPKEATSSKQIAEMFQAQK
NNHPSNQDESDDD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggagccatctcgcccctctgcacatcacgttctcatgtccaatgctcgagccgcatcc
gccaagaagaagacgacgacctccacttcgtcaagctcgccgaagaaaaggaaactcggc
gaaacccgaaccgccggttcggacaaaacccttgtttcgaaacctgtttctgattccgta
aaacccaaatcggattctttatctactgttgaagactcaaagtctagggctttgatcaaa
atcgctgaactgaagaacagaatcgggtttctgaagagtaatcccgatagtttcgatcct
gaatcagtggcttggtgggagaaaggagagagagttccgtttatgtttctctgtttggtt
tttgatctgatttcaatcgaaaacaacagaaaaagtggtcggattgtgatcactgatgtc
ctgtgtaacatgttgagaaccgtgatcgccacgactcctgaaaatctgatcgctacggtt
tatctcgctgcgaatgagatcgctcctgttcatgaaggtgttgaattgggtatcgttaaa
agttccattacaaaggcaatctccgaagcttttaatagatcagatgctcaagttgagcag
cttctgaaaacggaactagcagacttgtggcttttagtaacagaaagccgttcctctcaa
gctacggttttcaacttcaagcctaaacctttgactattgtcaaggtttttgatacattt
cgacaaatcgctaaggaaagtggaaaagatagtcagagaaataagaagaatcggattaca
ggacttcttgttgaaacaacagactgtgaaactctttacttaactcgtttacttgaggga
aatctacggttagggttctcgggtaagattgtcttagctgcattgggacaagccgctgtg
tataatgaagagcactcaaagccaccaccaaatatcaagtctcctttagaagaggctgcg
aagattgttaaaagagtatacagtgtgcttcctgtctacgacatgattgttcatgctctt
ctaaccggtggtgtgtggaatcttaccaaaacttgtaacttaacacttggtgttccaatt
agacccatgcttgtgaaagtaattaaaagtatagatcagatactcaataacttcgagggc
accgttttcacttgcgaatacaaatatgatggtgaacgtgtgcagatacattatatggag
gatggtatattcgagatatacagtagaaatggtgaaagaagtactggcaagtaccctgat
gttgctcgtgcgttcaaaagatcaaagaaggcctctgtgaaatcttttattctggattgc
gaggttgttgctttcgacagagaggaaaagaaaattcttccctttcagattttgagcact
cgagcgcgtaaaaatgtgaaagtgagtgatatcaaggttggcgtatgcatctttgctttt
gacatgttatatttaaattgccaacaacttatccaagagaatcttgatattcgccgagag
aagctatacaattcatttgaggaagatcttgggtatttccagtttgtaactgctctaaca
tcgagcgatacagatgatatagaagagtttttcgaagcttctgttgacatcggcattggg
gattctgttgatcttgtaccaattggtgcttttcacggcaaaggcaaacgtgcaggttta
tttggctcatttttattagcttgctacgacaagaaaaaggaagagtttcagagcatttgt
aaaataggtactggattttctgaagccgagcttaaagagctgtattctcttctttcctct
catatgattgccaaaccacaagtaggatatttcgttcttcgttcttctcttggacctttt
cagtgtcatatatgtatcttgactgagttcttgttgtttgcaatgtgtcaaactatccag
catgactatcgtgttggtgacagcgacaaaccacatgtttggttcgagcccactgaggta
tgggaagtgaaaggagctgacttgacaattagccctaagtatggtgcagccataggcatt
gtggtccctgataagggaatttctctacgttttcctcgtctaatccgtgtgcggaaagat
aagaagccaaaggaggctacgtcatctaagcagattgctgagatgtttcaagctcagaaa
aataatcatccaagcaatcaagacgagagtgacgatgattga
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