Eutrema salsugineum (saltwater cress): EUTSA_v10028358mg Help Entry EUTSA_v10028358mg CDS       T02985                                  Name (RefSeq) hypothetical protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism eus  Eutrema salsugineum (saltwater cress) Pathway eus04148   Efferocytosis Brite KEGG Orthology (KO) [BR:eus00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     EUTSA_v10028358mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:eus04131]     EUTSA_v10028358mg Membrane trafficking [BR:eus04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     EUTSA_v10028358mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_Vps8 Beta-prop_VPS8 TPR_Vps41 Clathrin Beta-prop_WDR5 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st WD40 WD40_Gbeta ANAPC4_WD40 WD40_WDHD1_1st TPR_VPS8_2 Beta-prop_EML_2 Beta-prop_THOC3 zf_RING_Vps8 WD40_Prp19 WDR55 Beta-prop_HPS5 zf-RING_Vps41 Beta-prop_EML Beta-prop_IFT140_2nd Motif Other DBs NCBI-GeneID:  18014914 NCBI-ProteinID:  XP_006396337 UniProt:  V4KIX1 LinkDB All DBs Position Unknown AA seq 1962 aa AA seqDB search MELDLDSFLVSDSDSESDLDSSSVPHRTVDEILNASSSSSPSSSPPSSPPLIRDQVNRRN QNDPTRRLSEALSNVSVRPESVDSEVYRGFPRVSDPTRRNSPSTSSLRQLPLPSLFAGVR SNVKPGAALAAAVAASRLVPTPHAAIIKSRRASSASSELMQQVLGAGESVSNQDADDQEV FSTNGVSVGVAVGSVSVDEFRSSGGESRLEDEDNGAELASQESEANVIEVQPSDSNVTVA DARDYEENSKPDLVTASYGVDAEGDVPAEQETMTTMEAENAAVEGVTDDTVVVSLLESSG SQHLNDSDGNSSSYSQSGDAKASNDEESSVGDVKNDDLDRITPDSKEEGVDAFIRDDGSS MSGISELVEERIEELEKERMSKREKLKSRSFRKQLDLAEEFEKKQAYTGLHWEEGAAAQP MRLEGVKIGSTNLGYFDVDANNLISGTISSQAFKRDHGSPQVLAVHLNFIAVGTSKGVIV VVPSKYSSDTADQMESKLIWLGLQGDRSLSPVTSVCFNQQGGLLLAGYGDGHVTVWDVQR ASVAKVITEHTAPVVYAFFIGRDSQGSRQFKVITSDTKGVVFKHTFSWTLLLNMYSVKTQ CLLDGQKNGMVLSASPLPDDIFGSSLASSKVGNTAVPSSSISSMMGGVVGVDSSWKLFNE DSSAVEEGVVIFVTYQTGLVVKLIPNLEVYAQLPRPEGVREGSMPYTAWKCSMENSSKEA EDRVSFLAIAWDRRVQVAKLVKSDLKEYAKWSLDSVAIGVVWLDDQLLVIPTVTGHLYLF TRDGVVIHQTNFSVDGSSGNDLISYHTYFTNVFGNPEKAYHNSVGVRGASVYILGTAHLV ISRLLPWKERVDVLRRGGDWMGAFNMAMSLFNGQAHGVVDLPKTVDAIREAIAPSLAELL LSYVDEVFSYISIAFSNQIEKNGVTHEPSSGTKNANLEIEEQYNRVGGVAVEFCVHINRM DLLFDEIFSRFVAVQQRDTFLELLEPYILKDMLGSLPPEIMQALVEHYSRKGWLQRIEQC VLHMDISSLDFNQVVRICREHGLYGALLYLFNKGLDDFRSPLEELLIVLRNSERQRATTI GYRMLVYLKYCFLGLAFPPGHGTLIPTRLPSLRTELIQFLLEKSNVHDSSTCVKSQRIYL NLYHLLEMDTEATLDVLRYAFAENEMVNHENHLLESGEVSLESKTDSSMPEDGCNDMLIQ NLIDALVLVLDAGLNQPDESGDPDGSKSDKNWPSKEDRSHLFEFVAYYAARGRVSIPKSI LAHILEYLTSDHILRTYNISPKMRENQLLNLLKAVPETNWDAAYVSQLCETAHFYKVCGY IHTIGRRYVAALESYMKEADEPLHSFCYVNKMLSQLRGDEFTAFHSAIISRIPQLLELSR EGAFFLIIDNLKDNITRILEQLHSHPRSLFLYLKTVIEVHLSGSLEFSHLRKHEAVDSSG ENIRRDMPKEVEIYLEGLNGFPKFIQDNPVNVTDDMIELYVELLCKYEPKSVLRFLETFD SYRVEHCLRLCQEYGIIDAAAFLLERVGDAASALSLTLSGLNEKFAELENAVECLVSELM LGASEEASLELFSSALELKEVHDIQGVLQACIGLCQRNTPRLNPEESEILWFRFLDTFCE PSMDSYQEPRNVNEIYKGLADVKSLELPVDEAADTVKWRIPRSDAAGTHILRKLISQFIK EIVEGMIGYVRLPTIMSKLLSDNGTQEFGDFKLTILGMLGTYGFERRILDTAKSLIEEDT FYTMSLLKKGASHGYAPISLLCCICNCPLTKTFSTLRVRVFNCGHATHIQCEPSENEMSS SSSSSSSSSIHVASSGCPVCMTKKTTQRSSKGKSFYLDYGLISTVSSSTGTSQRTSLYSH ENEMIDHSHSQQIPRFEILTNLQKDQRLVQIESLPRLRLSPPAVYHEKVSRVSGFTPGES SGKDTKPVKPSQSGLSMKMKAKGSIFRPRLGKSVFSRPRVGN NT seq 5889 nt NT seq  +upstreamnt  +downstreamnt atggaactcgatctcgattcgttcctagtatcggactcggattccgaatccgatttggat tcttcatccgttcctcaccgtacagtcgacgaaattctcaacgcttccagttcttcatct ccgtcgtcttctcctccttcatctccgccgttgattagagaccaagttaaccggcggaat caaaacgatccgactcgccgcttatcagaagctctttcaaacgtttccgtgagacctgaa tctgttgattccgaagtatatcgcggattccctcgcgtaagcgatccgacgcggcgaaat tcgccatcgacttcttctctaagacagttgccattgccgtcgctattcgcaggagtgcgg tcgaatgtgaagcccggcgcggcgcttgcggcggctgtggctgcttcgagattggttcct acaccacacgctgctatcatcaagtcgaggagagctagcagtgctagtagcgagttgatg cagcaggttttgggagctggagaatcagtttcaaatcaagacgcagatgatcaggaagta ttttctacaaatggcgtttctgtcggagttgctgttggatccgtttctgttgatgaattt cgttcttccggtggagaatctcgtctggaggatgaggataacggagctgaacttgcaagt caagaaagcgaagctaatgtaatagaagtccaacctagtgatagtaatgtgaccgttgct gatgcccgtgattatgaggaaaactcaaaacctgacttagtcactgcctcctatggtgtt gatgctgaaggagacgtccctgcagaacaagagacgatgaccacaatggaagctgaaaat gctgctgtggaaggcgtcacagatgacacagttgtcgtttctttgctggagtcttcaggg tctcaacatttgaatgattctgatgggaattcctcttcttattctcaatcgggtgatgct aaggcaagcaacgatgaggaatcaagtgttggagatgttaagaatgatgatttagataga attacaccggattctaaagaagagggagttgatgcttttattcgtgatgatggaagctca atgtctggcatttcagagcttgtggaagagaggattgaggagttggaaaaagaaaggatg agtaaaagagagaaactaaaatcacgatcttttaggaaacagcttgacttggctgaagag tttgagaagaaacaagcatatactggtttgcattgggaggaaggggctgctgctcagcca atgagacttgagggtgttaagatcggttcgacgaatttaggctactttgatgttgatgct aacaatctcatcagcggaaccatttcgtcgcaggcatttaagagagaccatggttctcct caggttttggctgttcatttgaattttattgcagtgggtacgtccaagggggtcatcgtc gttgtaccaagtaaatattcttctgatactgcagatcagatggaatcaaagctgatttgg cttggtttacaaggagacagatccctgtccccggttacctcggtttgcttcaatcagcaa gggggcctcctgctagccggttatggtgatggacatgttacagtttgggacgtgcagaga gcgtcggtagcaaaagtgatcactgaacacactgcaccagtagtttatgcgttttttata ggtcgggattctcaaggttctcgccaatttaaagtaatcacaagtgataccaagggtgtc gttttcaagcatactttctcttggactctgttgttgaacatgtactcggtaaaaacgcag tgtcttctcgatggacaaaaaaatggaatggtcctctcagcatcacctctgcctgatgat atttttggaagctccttggcctcttctaaggtgggtaacactgcagttccatccagcagt ataagtagcatgatgggaggtgttgttggggttgattcaagttggaagctctttaatgag gattcatctgcggtagaagaaggggttgtcatatttgtcacctatcaaactggactggtg gtaaagctcattccaaatttggaggtgtatgcacaacttcctaggccagaaggggttcgg gagggttccatgccatacactgcctggaaatgctcaatggaaaattcttctaaggaggca gaagatagggtttcttttcttgccattgcctgggatcgtagagttcaggttgccaagttg gtaaaatcagacctaaaggaatatgccaaatggtcacttgacagtgtagctattggtgtg gtttggctggatgaccagttgctggtgatcccaactgtgacgggccatttgtatctgttc acaagagatggtgtagtaattcaccagacaaacttttctgtggatggttcttcagggaat gacctgatttcctatcatacatactttacgaatgtctttggaaatcctgagaaagcttat cacaactctgtgggtgtcagaggggcttcagtatacattctcgggactgctcatcttgtt atctccagacttttgccatggaaggagcgggttgatgttttaaggagaggaggtgattgg atgggtgcatttaacatggcaatgtcactttttaatgggcaggctcatggggttgttgac ctccccaaaactgtggacgccataagggaagccatagcacccagtttagcagagttgcta ctctcctatgtagatgaagtattttcttatatctcaatagcattttccaaccagattgaa aaaaatggagtaactcatgagccaagcagtggaaccaagaatgctaatttagagatagaa gaacaatacaatcgtgttggtggtgttgccgttgaattttgtgttcatattaacaggatg gatttgctcttcgatgaaatattttccagatttgtggctgtacaacaaagagatacattt ttggaacttttggagccttatattttaaaggatatgcttggatcgcttcctccagagatt atgcaagcactggtagaacattatagtaggaaaggatggctacaaagaattgagcagtgt gttctgcacatggatatttcttccttagatttcaatcaggttgtcagaatttgccgtgag catggcctttatggggccttgctatatcttttcaacaaagggttggatgatttcaggtca cctctggaggaactcttgattgtcttacggaacagtgagagacaaagggctacaacaatt gggtaccggatgcttgtttatctaaaatactgctttcttggtttggcttttccaccagga catggaactctgattcctacacgcttgccatcccttaggaccgagctgattcagtttcta ctggagaaatcaaacgtccatgactctagtacatgtgtaaaatctcaacggatttacttg aacctctaccacctgctagagatggatactgaagccactttagatgtcctaagatatgca tttgcagaaaatgaaatggtgaatcatgagaatcatctgctggagtccggtgaagtaagt ttggagtccaagactgatagcagtatgcccgaagatggatgtaacgatatgttgatccag aatctgatagatgctctagttcttgttcttgatgcggggttaaatcaacctgatgaatct ggcgatccagatggttcaaaatcagataaaaattggccctccaaggaggatagaagtcat ttatttgagtttgttgcatattatgcagcacgtggcagagttagtattccgaagagcata ttggcacatattttagagtacttaacatcagatcacattcttcggacatataacatatct cctaaaatgagagagaaccaattactaaaccttttgaaagctgtaccggagactaattgg gatgcagcttatgtgtctcagctttgtgagacagcacatttttataaggtctgtggctat attcatactatcggtcgacgatacgttgctgctttagaaagctacatgaaagaggcagat gaacccctacattcgttttgctacgtgaacaagatgctctcacagttgaggggagatgaa tttactgcttttcattctgcaataatttctaggattccacagctcctagaattgagcaga gagggagcattctttctgatcattgataatctgaaagacaacattacacgcattctagaa cagctccattctcatccaagaagcttgttcctttatctcaagactgtcattgaggttcac ttgtctgggagtcttgaattttctcatctaagaaaacatgaggccgtagatagttcgggt gaaaacattagaagggatatgcccaaagaggttgagatttatttggaaggacttaatggc tttcccaaattcatccaagataatccagtcaatgtgactgatgatatgattgagctttac gtggagctattatgcaagtacgaaccgaagtccgtcttgagattcctggaaacctttgac agctaccgagtggaacactgtctacgtctctgccaggaatatggtattatagatgcagcg gcattcctcttggaaagggtaggtgatgcagcaagcgctttgtcacttacactctctgga cttaacgaaaaatttgccgagcttgaaaatgcggtggaatgcctagtgtcagaattgatg ttgggtgctagcgaagaagccagcttggaactgttcagtagtgctctagagttgaaggag gtacatgacatacaaggtgttttacaagcctgtataggattgtgtcaacgcaacactccc cgtcttaatccagaggagtcagagattctttggtttcgctttcttgatactttctgtgaa ccttcgatggattcatatcaggaaccgaggaacgtcaatgaaatatacaaaggccttgcg gatgttaaatcgttggaactgcctgtagatgaagcagccgacacagtcaagtggagaatt ccaagatctgatgcagcgggtacacacatcctgaggaaactcatatctcagtttatcaaa gagattgttgaaggaatgataggatatgttcgtcttccaacaatcatgtcaaaacttctt tctgacaatggtactcaagaatttggtgattttaaacttacaatattgggaatgcttgga acatatggcttcgagcggagaatactggatactgcgaagtccttaatcgaagaggataca ttctacaccatgagcttactcaagaaaggtgcttctcatgggtatgcacccataagtttg ctttgttgtatatgcaattgtcctctcaccaagacattctctactcttcgtgtacgtgtt ttcaactgcggccacgcaacacatattcagtgtgaaccgtcagagaatgagatgtcatca tcatcatcatcatcatcatcatcatcaattcacgtcgcgtcatcaggttgtcctgtttgt atgaccaagaagaccacgcaaagatcatctaaaggtaaatcattctacctagattatgga ctgataagcacagtttcttcaagcaccgggacttcacaacgcacgtcgctttactcacat gagaatgaaatgatcgatcattctcatagccaacaaataccaaggtttgaaatcctaacc aatctacagaaagatcagagattggtacagatagagagcttgcctcgattaaggctttca cctccagctgtgtaccacgaaaaagtgagcagagtctcgggttttacaccgggtgagagt agcggcaaagacacgaaacctgtaaaaccatcccaaagtggactgagtatgaaaatgaaa gcaaaaggatcgatttttcggccaagacttggtaagtccgttttttcaaggccaagagtt ggtaattag

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