Eutrema salsugineum (saltwater cress): EUTSA_v10028404mg
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Entry
EUTSA_v10028404mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03430
Mismatch repair
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EUTSA_v10028404mg
03460 Fanconi anemia pathway
EUTSA_v10028404mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10028404mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
EUTSA_v10028404mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
FAA_hydrolase_N
Motif
Other DBs
NCBI-GeneID:
18015093
NCBI-ProteinID:
XP_006396455
UniProt:
V4LDN4
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MQGDSSPLIRPINRSVVHRICSGQVILDLSSAIKELVENSLDAGATSIEINLRDYGEDYF
QVIDNGCGISPTNFKVLALKHHTSKLEDFTDLQGLTTFGFRGEALSSLCALGNLTVETRT
KNEPVATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFTNLPVRCKEFKRNIRKEYGKLVS
LLNAYALIAKGVRFVCSNTTEKTPKSVVLNTQGRGSLKDNIVTVFGMSTFTSLQPVSICI
SDDCRVEGFLSKPGQGTGRNMADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVAIL
DFIVPGGACDLNVTPDKRKVFFSDETSVMGSLREGLNEIYSSSNASYTVNRLEENPEQPE
KAGVSSLQEKSNLLSKGIVLDVGSKTSVAEAVEKEISPSREAEIEDSSALEKFKFDIKAR
GTKKGESSSSVNDESLSVIHSNKTASKALPHFNVIEKVTTDASKDLSNRSSFSQSTLNTF
VTVGKRKHENISTILSETPVLRNHTPGFRVEKSKFEVRALAARCLMESDEVDGMVVSKED
VTPNEMDSELGDRISPGTHTDNVESHRREPKKPISCEEPASDNTRTEGGTERILEDNPRC
SQPLRPVATVLDSPAQSTGPKMFSTLEFSFQNLRKRRLERLSRIQSTGYVSKCMNTPRPK
RCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFIIAKLDRD
LFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLTLELSAEEEVTILMHMDVIRENGFLLE
ENPSAPPGRHFRLRAVPYSKKITFGVEDLKDLISSLGDNHGECSVISSYKSSKTDSVCPS
RVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNCPHGRPTMRHLVDLTTLLT
LPDDDNGDDDAAISLS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggagactcgtctccgttgataagacccatcaacagaagtgtggttcacagaatc
tgctccggtcaagtcatcttggacctctcctcggctatcaaggagcttgtcgagaacagt
ctcgacgccggagccaccagtatagagataaacctccgagactacggcgaagactatttt
caggtcatcgacaacggctgtggcatttctcctaccaatttcaaggttctcgcactcaag
caccatacttctaagttggaggatttcacagatcttcagggtttgactacgtttggtttt
agaggagaagctttaagttctctctgtgccttgggaaatctcacggtggagacaagaacc
aagaacgagccggttgctacgctcttgacttttgatcattccggcttgctcactgctgag
aagaagactgctcgccagatcggtaccactgtcactgtgagaaagttgtttactaattta
cctgtacgatgcaaagagttcaaacgcaatatacgcaaagaatatggaaagcttgtatca
ttattgaatgcatatgcacttattgcgaaaggagtgcgctttgtctgctctaacacgact
gagaaaaccccaaagtctgttgtgctgaacacacaagggaggggttcacttaaagataat
attgtaacagtattcggcatgagcacctttacaagtctacaaccagtaagtatatgtata
tcagatgattgtagagttgaagggtttctttccaagcctggacaaggtactggacgcaat
atggcagatcgacagtatttctttataaatggtcggcctgtagatatgccgaaagtcagc
aaattggtgaatgagttatataaagatacaagttctcggaaatatccggttgccattctg
gattttattgtgcctggtggagcatgtgatttgaatgtcacgcctgataaaagaaaggtg
ttcttttctgacgagacttctgttatgggttctctgagggaaggtctgaacgagatatat
tcctctagtaatgcatcttataccgttaataggctcgaggagaatcccgagcaaccagag
aaggctggagtttcatctcttcaggagaaatcaaatctcctgtcaaaagggattgttctt
gatgtcggttctaaaaccagcgttgcagaagctgttgaaaaggaaatttctccctcaagg
gaggctgagatcgaagatagttcggcattggagaagttcaaatttgacatcaaggcacgt
gggactaagaaaggggaaagctcttcatcagtcaatgatgagtccctatctgtaattcac
tctaacaagacagctagtaaagctttgcctcactttaatgtgattgagaaagttactact
gatgccagtaaagacttaagcaatcgctctagcttttcccagtcaactttaaatactttt
gttactgtgggaaaaagaaaacatgaaaacataagcaccatcctctctgagacacctgtc
ctcagaaaccacactcctggttttcgtgtggagaaaagcaaatttgaagttcgtgctttg
gctgcaagatgtctgatggaaagtgatgaggttgatggtatggtcgtctcgaaggaagat
gtgacgccaaacgaaatggactctgaactaggagatcggatttctcctggaacccatact
gataatgttgaaagccacagaagagaacctaaaaaaccaatatcttgtgaagaaccagca
tcagataacacacgcaccgaggggggtacagaaaggattttggaggacaatccacgttgc
agccagccactgcgacctgttgccacagtgctagactccccagctcagtcaaccggtcca
aaaatgttttccacattagagtttagttttcaaaacctcaggaagaggaggttagaaagg
ctgtcgagaatacagtccacaggttatgtatcgaaatgtatgaacacgccacggcctaaa
aggtgctttgccgctgcaacattagagttatctcaaccggatgatgaagagcgaaaggca
agagctttagctgcggctacttctgagcttgaaaggcttttccgaaaagaggatttcagg
agaatgcaggtactcgggcaattcaatcttggattcatcattgcaaaactagatcgagat
ctgttcattgtggatcagcatgctgccgacgagaaattcaacttcgaacacctagcaagg
tcaactgtcttgaaccagcaacccttactccagcctttgacgttggagctctctgcagaa
gaagaagttacaatcttaatgcacatggatgttatcagggagaatggctttcttctagag
gagaatccaagtgctcctcctggacgacattttagactgagagcggttccctacagcaag
aaaatcaccttcggagtcgaagatcttaaagacctaatctcaagtcttggagataaccac
ggggaatgttcagttatcagtagctacaaaagcagcaaaacagattcggtttgtccatcg
agagtccgtgcaatgctagcatcgagagcatgcagatcgtctgtgatgatcggagatcca
ctcagaaaaaacgaaatgcagaagatagtagaacacttggcagatctggaatctccttgg
aactgtccgcacggacgaccaacgatgcgtcatcttgtcgacttgacaactttactcaca
ttacctgatgacgacaatggtgatgatgatgcagccatctcactctcatga
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