Eutrema salsugineum (saltwater cress): EUTSA_v10028433mg
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Entry
EUTSA_v10028433mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EUTSA_v10028433mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10028433mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
EUTSA_v10028433mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
18014463
NCBI-ProteinID:
XP_006397347
UniProt:
V4KLL7
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MLEYRCSSVDWKPSPVVALANSADDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPN
SRISSLAWCRAGSKRLPSGRLFSSSIDGSISEWDLFDLKQKTVLESIGISIWQMAVAPTN
VPSVDAEGKADNRIENGYSSEKSNDEEESGSEDESDSYEFHEQSEDTDRLLAIACDDGCV
KLYRISDLNKLTYYRSLPRVSGRALSVTWSPDAHRIFSGSSDGLIRCWDANSCHEVYRIT
VGLGGLGSTSGTCVWSLLSLRCAVLVSGDSTGTVQFWDSQHGTLMESHSSHEGDVNTLAA
APSHNRVFSAGADGQVILYKLSGSTNSSQDLKPSSSLKWDYIGYVKAHTHDIRALTVAVP
ISREDPFPDDMLPDRSARKQRKKGKPVDFTYQKWAHLGVPMLISAGDDAKLFAYSIQEFT
KFSPHDICPAPQRVPMQMVHNSVFNQTSLLLVQGISDLDILRLNVSNDSSGRASTKPLVR
VKSRDARKIICSAISNTGSHFAYSDQIGPSLFELRRNETAKSPWSVSRRRLPTLPFAHSM
IFSSDCSRLITAGHDRKIYAIDISSMELVDTFTPCREEQEGESSPMEPPITKLYTSSDDQ
WLAAINCFGDIYVFNLETQRQHWFISRLDDASVAAAGFHPWNNNALVISTSSNQVFAFDV
ESRQLGKWSLLHTNVLPKRYQEFPGEVIGLSFSPSPNSSSVIIYSSRAKCLIDFGKPVAE
DEENEFPNGNLSKTLEGKLVNMGLKLGKGTNRKRRLEEYQLEGKSKERKNFEILPSKHPV
LFVGHLSKNSIMVIEKPWMDVVKSFDTQPVDRHIFGT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagtaccgttgcagctctgttgactggaagccatctccggtggtagccctagct
aacagcgccgacgattctcaagtcgccgcggctcgcgaggacggttctcttgaaatctgg
ctcgtttcccccggcgccgtaggatggcactgtcaactcaccatccatggcgatccaaac
tcgagaatctcgtcccttgcgtggtgccgtgctggttcaaaacggctgccttccggccgt
ttgttttcttcgagcatcgatggctcgatttctgagtgggatcttttcgacttgaagcag
aagactgtgctcgagtcaattggaatctcaatctggcaaatggctgttgctccaactaat
gttccctccgttgatgcagaaggtaaagctgataaccggattgagaatggatactcgagt
gagaaatcgaatgatgaggaagaaagtgggagtgaagatgaatctgactcgtacgagttt
catgagcaatcagaggatacagataggcttcttgcaattgcctgtgatgatggctgtgtg
aaactataccgtatctctgacttaaacaagttaacatactatagatcattgcctagggtc
agtggacgtgccttaagtgttacatggagtccagacgcacataggatcttttcgggtagc
agcgatgggctaataagatgctgggacgctaactcctgtcacgaggtatacagaattaca
gttggtcttggaggactaggaagtacttctgggacctgtgtttggtcacttctttctttg
aggtgtgcagttcttgttagtggagatagtacaggaactgtccaattttgggatagtcag
catggaactcttatggaatcacactctagtcacgaaggtgatgtcaatacccttgcagca
gcccctagccataatcgagtcttttctgctggtgcggatggacaggttattctttataag
ctctctggtagtacaaacagttctcaagatttaaagccttcttcctctctgaagtgggat
tatattggctatgtaaaggctcatacacatgacatcagagctcttacagttgctgtacca
attagtcgagaagatccctttccggatgatatgttgccagataggagtgcacgtaaacaa
cgcaaaaaagggaagccagttgactttacttaccaaaaatgggctcatttgggtgttccg
atgctcatttccgctggtgatgacgcaaagctttttgcatattcaattcaggaattcact
aagttctccccacatgatatatgtcctgcgcctcagagagtacccatgcaaatggtacat
aactcggtgttcaatcagacttctcttctcctggttcagggtattagtgatttagatatt
cttcgacttaacgtaagcaatgattctagtggacgtgcctcaacaaagccattggttcgt
gttaaaagtagggatgccaggaagatcatatgcagtgcaatttctaacactggatcacat
tttgcttattctgaccaaattggccccagtctgtttgagttgaggagaaatgaaactgcc
aagagtccatggagtgtcagtagaaggcgacttcccacacttccatttgcccattccatg
attttcagttcagactgctcacggctgataacagcagggcatgatagaaaaatatatgct
attgacattagtagtatggaactagtagatactttcacaccatgtcgggaggagcaagaa
ggtgaatcttcacctatggagcctccaataacaaaattgtatactagctcagatgatcag
tggttagctgctatcaattgctttggggatatctatgtattcaaccttgaaacacaaagg
cagcactggttcatatcaaggcttgatgatgcatccgttgcagctgctggttttcatcct
tggaataacaatgcccttgtgatctcaacctcctcgaaccaggtctttgcttttgatgtt
gaatctagacagttgggcaagtggtcgcttctgcacactaacgttctgccaaagaggtac
caagagtttcctggcgaggtcattggactctcattctccccgtctccaaattcatcttct
gtaataatttacagttccagggcaaagtgtttgattgacttcgggaagcctgtggcggaa
gatgaagagaatgaatttccaaacggcaatctatctaaaacactagaaggtaaacttgtc
aacatggggttgaaattggggaaaggtacaaaccgaaaacgtcggttagaagagtatcag
ttagagggtaagagtaaagagagaaaaaactttgaaatcttaccctcaaagcaccctgtt
ttatttgtgggtcatctttctaaaaactcaatcatggtgattgagaaaccatggatggat
gttgtcaagagtttcgatactcaaccagtggacagacatatttttgggacttga
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