KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10028629mg
Entry
EUTSA_v10028629mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
eus  Eutrema salsugineum (saltwater cress)
Pathway
eus04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:eus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    EUTSA_v10028629mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eus04121]
    EUTSA_v10028629mg
Ubiquitin system [BR:eus04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     EUTSA_v10028629mg
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th eIF2A Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_Vps41 Aldo_ket_red Tricorn_2nd Beta-prop_SCAP Beta-prop_SPT8 Peptidase_M10_C MIOS_WD40 Beta-prop_VPS8 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 18014591
NCBI-ProteinID: XP_006396831
UniProt: V4L3Q4
LinkDB
Position
Unknown
AA seq 474 aa
MEEDPPGDNQTAKSASQLNLPPSMNRPTVSLETRINRLIDYKHYHSPSKPIYSDRFIPSR
SGSNFELFGLEPSPKKDGKEEAAGSYAGLLRAALFGPETPEKSDVVTGFSPSRNIFRYKT
ETQRSTNSFSPFGSDEAPGVSRSPAKSPRKILRSAYKVLDAPALQDDFYLNLVDWSAQNV
LAVGLGNCVYLWNACSGKVTKLCDVGIDDSVCSVGWALRGTHLAIGTSSGTVQIWDASRC
QRIRTMEGHRQRVGALAWSSSVLSSGSRDRSILHRDIRSQEDHVSKLTGHKSEVCGLKWS
YDNRELASGGNDNRLFVWNQHSTQPVLRYCEHTAAVKAIAWSPHHYGLLASGGGTADRCI
RFWNTSSNTHLSCIDTNSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGH
TFRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRESEIGALSFGRSTIR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggaagaagatcctccaggagacaatcagacggcgaagtcggcatctcagctgaatctt
ccgccgtcgatgaatcgaccgacggtctcactcgagacccgaatcaaccgtttaatcgat
tacaagcactatcactctccatcgaagccgatatactccgataggtttattccgagtaga
tctgggtctaatttcgagcttttcggcctcgaaccgtcgccgaaaaaggacggcaaggaa
gaagcggcgggttcttacgcgggtcttctgcgagccgcgctttttgggccggaaacgccg
gagaaaagtgatgtcgttactgggttctctccgtcgcggaatattttccggtataagacg
gagacgcagaggtctacgaactcgttctcgccgtttggctctgatgaggctcctggtgtt
agccgtagccccgccaagtcgccgaggaagattcttaggtcggcttataaggtattggat
gcgccggctctgcaagatgatttttacttgaatctcgtggattggtcggcacaaaatgtt
cttgcagtgggattagggaactgcgtttatttgtggaatgcttgtagtggcaaggtgact
aagttatgcgatgttgggattgatgacagcgtttgctcagtcggttgggcactgcgtgga
acacatttggcgattggaactagtagcggaactgtacagatttgggatgcgtcgcggtgc
cagagaataagaacaatggaaggtcatcgtcaaagggttggagccttggcatggagctca
tcagtactgtcttctggaagcagagacaggagtatacttcacagagacatacggtctcaa
gaagatcatgtcagtaagctaacaggtcacaaatccgaagtctgtgggctcaaatggtct
tatgataaccgtgagctagcatcaggcggaaatgacaataggctttttgtgtggaaccaa
cactcaacacaaccggttttgagatactgtgaacacacagcagcggttaaagccattgcg
tggtctccacatcattacggacttcttgcttccggtggtggtactgctgatagatgtatt
cgtttctggaacacgtcgtcaaacactcatttaagttgcatagacaccaatagtcaggtt
tgtaacctggcttggtctaagaacgtgaatgagcttgtgagcacccacggatattcccaa
aaccaaatcatcgtatggaaatatccaaccatgtctaaattagcaactctcacgggtcat
acgttccgcgttctgtaccttgcggtctcaccagatggacagacgatcgttacaggagca
ggagatgaaaccttaagattctggaacgtcttcccttccccgaaatctcagagcagggag
agcgaaattggggcattgtcttttggtagatcaacaatccggtga

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