Eutrema salsugineum (saltwater cress): EUTSA_v10028659mg
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Entry
EUTSA_v10028659mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10028659mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
EUTSA_v10028659mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
Cytochrom_D1
Beta-prop_SCAP
WDR54
Motif
Other DBs
NCBI-GeneID:
18015309
NCBI-ProteinID:
XP_006396529
UniProt:
V4L6Q4
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MADLDHEISQVTRLKSSPHQRLSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCH
MLSRYLPVKGPWLVDQMNSRAYVSQFSTDGSLFIAGFQGSHIRIYNVEKGWKVQKDILAK
SLRWTVTDTSLSPDQRNLVYASMSPIVHIVDVGSGTTESHANVTEIHDGLDFSSGGYSFG
IFSVKFSTDGRELVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADEIGNLILSGG
DDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIRKMS
SSVPPKHEVNRNYEWDYRWMNYPPESRDLKHPYDQSVSTYKGHSVLRTLIRCYFSPAHST
GQKYIYTGSNDTSVYIYDLVSGDKVAVLKHHSAPVRDCNWHPHYPTLISSSWDGDLVKWE
FSGSGEAPIMSEKRVRRRHFYY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttagatcatgaaatcagccaggtcactaggctgaaatctagtcctcatcaa
cggttaagccgtgaagtccctgggagacatcagttacccgtgtccactgtgaggatgttg
gctggtcgagaaagtaatttctctggaagagggaggttttccgccgctgattgttgtcat
atgctaagcagatatttgcctgtgaagggtccttggcttgtagatcagatgaatagccga
gcatatgtatctcagttttcaactgatggctctctctttattgcggggtttcagggaagc
catattcggatttataatgtagagaagggctggaaagttcaaaaggatattcttgcgaaa
agcttgcgttggactgttaccgatacttctctgtcccctgatcagcgaaatctggtttat
gcaagcatgtcacctattgttcacatcgtggatgttgggtctggtacaaccgagtctcat
gcaaatgttacggagatccatgatggattagacttctcttctggagggtactcttttgga
atattctctgtgaaattttcaaccgatggacgagaacttgttgctgggagtagtgatgat
tccatttatgtttatgatcttgaagcaaatcgagtttcactccggactgttgcacacacg
tctgatgtaaatactgtgtgctttgccgatgaaattggaaacctgattttatctggtggt
gatgataatctctgcaaggtgtgggacagacgttgtttcattgggagagataagccagcg
ggtgttttggtgggacacctcgaaggtgttacctttattgatagccgtggagatggtcgc
tatttcatatcaaatggcaaagaccaaaccatcaaattgtgggatatcagaaaaatgtcc
tcaagcgttcctccaaagcatgaggtgaacagaaactatgaatgggattacagatggatg
aattaccctcccgagtcaagagatctaaagcacccttacgatcagtctgtgtcgacatat
aaaggtcactcagtgctgcgtactctgattcgttgctacttctctccagcgcatagtact
ggccaaaagtacatatacacaggatccaacgacacttccgtctacatatatgacttggtt
agtggagataaagtggcagtgctaaagcaccatagcgcacctgtaagagactgtaattgg
catccgcattacccaacgcttataagctcttcgtgggacggagatctcgtgaaatgggag
ttttctgggagcggtgaggcgccgatcatgagcgagaagagggttcgaaggagacatttc
tactactga
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