Eubacterium sulci: ADJ67_05335
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Entry
ADJ67_05335 CDS
T04038
Name
(GenBank) hypothetical protein
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
euu
Eubacterium sulci
Pathway
euu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
euu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ADJ67_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
euu03400
]
ADJ67_05335
Enzymes [BR:
euu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ADJ67_05335
DNA repair and recombination proteins [BR:
euu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ADJ67_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
UB2H
RecG_dom3_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AKT47116
LinkDB
All DBs
Position
complement(1161564..1164998)
Genome browser
AA seq
1144 aa
AA seq
DB search
MLNRKICLTGVSDSRSAKVISESIEKGKQCLIIVSGHRRAEKLAMDFSFFSERKVYILPE
DGHIFLDYSARNRDQDFARLKVIKALATEDEAVVIAPVSAAIKKMPPHRSYQNLNFSLKL
GQEIEVDELKRKLAELGYERNDIVATQGQFSIRGGIVDFYPPDADEPVRIEFFGSEIDSI
RSFDIETQRSIDNLKNIDIYPSKQLTPSDELIVKATETVKSLFDKQIAKLSNDEEKEDAA
NCLTEKKNELIEYISEFDNDSVLENYVHYFYPETEYIWDYMGDAMIVYEDFPRIEEHLEL
RSEELQNDLFTMLERGKAIPEDSQLIMGMDDLQKSFGIMPEIFMFPFGLTGKVKIDFDEI
RNIECRQMTSYAGHLDVLENDLKRIADGKNRVVISASSDERQQTIDDFVANIGLADKIQV
VQGSLSMGMVFPEEKLYIISDKDIFNSTRIGKKRHKTNRSQKMQSFSDFKTGDYVVHENH
GIGKFLGIQALEVQGEQKDYLKIKYSGTDLLYVPVEQMDIVQKYIGSEGIAPKVSKLSGD
EWKVAKTRAKLAIAEMTEELIKLYADRKASKGYAFSKDTVWQKEFEAYFSYQETDDQLTS
IEEIKKDMESNLPMDRLLCGDVGYGKTEVAARAIFKCISEGKQAAMLVPTTILANQHYNS
LKDRFSNFPFNIDMLSRFRTDKQQEKIIDGLKKGSVDFVIGTHRLLSDDIKYKDLGLLVI
DEEQRFGVAHKEKLKQLKSNIDVLTLSATPIPRTLNMSLTGIKDMSLITEPPSDRYPVQT
YVLEQDDIVMREIIARELDRDGQVYIVFNRVKGINRLAEKVQSLVPDAKIVVGHGQMNEK
SLESVMQTFISGEADILVATTIIESGIDIPNANTMIVIDADKCGLAQLYQLRGRVGRTDK
IAYAYLMYQKNKVLTEVAEKRLKAIKEFTEFGSGFKVAMRDLEIRGAGNVLGAEQSGHMM
NIGYELYCKLVDDAVRKAKGESVPEQVDEINIELDVAANIPNWYIDNETLKLQMYKKIAT
VSTREDSEEIIDELLDRFGDLPKETLNLIAISMIRALSANVGVCNIHEQAGKVVIYFAQD
NALKAYALMKASEKFGSKIFFHGGNEPFIRLSVARKERLDSIIDLLEIISDNKDIDNSGS
KTVS
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatagaaaaatttgtttaacaggtgtatcagacagccgttctgcaaaggtaatt
tcagagagtattgaaaaagggaaacaatgcttgattatcgtatcgggtcatcgcagagcc
gaaaagcttgcaatggatttctctttttttagtgagcgaaaagtttatatcttacctgag
gatggccatatattcctagactacagtgcacgaaatagagatcaggacttcgcaagattg
aaggttataaaggcgcttgcaacagaggatgaagctgttgtaattgcgcctgtttctgct
gcaattaagaagatgccaccacatcgctcttatcagaatttaaactttagcctaaagctt
ggtcaggaaatagaagtagatgaactaaaaagaaagctagcagaattaggctacgagaga
aatgacattgtagcaactcagggacagttttctatcagaggtggaatagttgatttttat
ccgcctgatgctgatgaacctgtaagaattgaattctttgggtcagaaattgattctata
agaagttttgatatagaaacccaaagaagcattgataatctaaaaaatatagatatctac
ccatcgaagcaactaactccaagtgatgagctgattgtaaaagcaactgagactgtgaaa
tctctatttgataagcaaattgcaaagctatcaaatgatgaagaaaaagaagatgcggca
aactgtcttaccgaaaagaagaatgagctaattgaatatatatctgaatttgataatgat
agcgtgctagaaaactatgtacactatttctatcctgagacagagtatatctgggattac
atgggcgatgctatgattgtctatgaagattttccacgcatagaagagcaccttgaactt
agatcagaagaactccaaaatgatctttttacaatgctagaaagaggtaaggcaatacct
gaagacagtcagcttatcatgggcatggatgatctccaaaagtcatttggaataatgcca
gaaattttcatgtttccatttggacttacgggcaaagtaaaaatagattttgatgagata
aggaatatcgagtgcaggcagatgacaagctatgcagggcatcttgatgtactcgaaaat
gaccttaagcgtatagcagatgggaaaaatagagttgttatttcggcatcatctgacgaa
agacaacagacgatagatgactttgttgcaaatattggactggctgacaaaattcaggtt
gtgcagggaagccttagcatgggaatggtattcccagaagaaaagctttatattatcagt
gataaagatatttttaactcaacaaggataggaaagaaacgtcataaaacaaatcgcagt
cagaagatgcagtccttctcggatttcaaaacaggagactatgttgttcatgaaaaccat
ggaataggaaagttcctaggaattcaagcgctagaagtccagggagaacaaaaggattat
ctaaagattaagtattctggtacagatcttctttatgttcctgttgagcagatggatata
gtccaaaaatatataggatcagaaggaattgcacctaaagtaagcaagctttcgggagat
gagtggaaggtcgcaaagacaagagcaaagcttgcaattgctgagatgactgaggaactc
ataaagctttatgctgacagaaaggctagcaagggttatgcgttctcaaaggatactgtt
tggcaaaaggaatttgaagcatatttcagctaccaagagacggatgatcagctcacatcc
atagaagagataaagaaggatatggaaagcaatctacctatggacaggcttctttgtgga
gatgtaggatatggaaagactgaagttgcagcgcgagcaatttttaagtgtatttccgaa
gggaaacaggctgctatgctagttccaaccaccatacttgcaaatcagcattacaattct
ttgaaggataggttttcaaactttccatttaatatcgacatgctttcaagatttagaact
gataagcagcaagaaaaaataattgatggactaaagaagggaagcgtcgactttgttata
ggaacgcacaggctcttatctgatgatatcaaatataaggacctagggcttttagttata
gatgaagagcaacgctttggtgtagcacataaggaaaagttaaagcagcttaagtcgaat
attgacgttttgacgctttcagcaacaccgataccaagaacgctaaatatgtcgcttacc
ggtataaaggacatgagcctaataacagaaccaccaagcgatagatatccggtacagact
tatgttctagaacaagatgatatcgtaatgcgagagataatagcaagagaactggataga
gacggtcaggtctatattgtatttaacagagttaagggtataaacaggctcgcagaaaag
gtacagtctcttgttccagatgcaaaaatagttgttggtcatggacagatgaatgaaaaa
agtctagaatctgttatgcagacctttatttcaggggaagcagacattttggttgctaca
actatcatagaatcaggaatagatattccaaatgcaaacacaatgattgttatagatgct
gataaatgtgggcttgctcagctataccaattaagaggacgggtaggaagaacagataag
atagcatacgcatatctaatgtaccaaaaaaacaaggttctaactgaagttgccgaaaaa
cgtcttaaggcaatcaaagagtttacagaatttggttcgggctttaaagttgctatgagg
gaccttgagataagaggagccggaaatgttctaggtgctgaacaaagcggtcacatgatg
aatataggatatgaactctattgcaaactagtggatgatgccgtgagaaaggcaaagggt
gaaagcgtcccagaacaggtagatgagattaatattgagctagatgtcgcagctaacata
cctaattggtacatagataacgaaactcttaagctacagatgtacaaaaagattgcaact
gtatctactagggaagatagcgaagaaattatagacgagcttctcgatagatttggagat
ctgccaaaggaaacactcaacctcatagccatatcaatgataagggcgctatcagctaat
gttggtgtttgcaacatacatgagcaagcaggaaaggttgttatttactttgctcaggat
aatgcactcaaggcatacgcacttatgaaggcaagtgaaaagttcggaagtaagatattt
ttccatgggggaaacgagccatttatcagactttctgtagctagaaaagaaaggcttgat
tccattattgatttacttgaaataataagtgataataaggatatagataatagcggatca
aagaccgttagttaa
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integrated database retrieval system
