Eubacterium sulci: ADJ67_05590
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Entry
ADJ67_05590 CDS
T04038
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
euu
Eubacterium sulci
Pathway
euu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
euu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ADJ67_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
euu03019
]
ADJ67_05590
Messenger RNA biogenesis [BR:
euu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ADJ67_05590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
AKT47158
LinkDB
All DBs
Position
complement(1207695..1209245)
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AA seq
516 aa
AA seq
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MTPTAVILIVVVGAVTLIAGLLIGYIYRKSVGEKIIGNAEQVAQNLILDAEKKSETIEKE
ITLEAKEEAHRVRNDVEKEVRERRNELTRSERRIAQKEETVDRKLSSIERKEEDLAKKQI
EISKQKEELDSFLEKRIVELERISGLTAEEAKQLLLTEIEKDVRHDASLMIKDIEMKAKE
EADIKAKDIIVGAIQRCAADQVAESTVSVVQLPNDEMKGRIIGREGRNIRAIETQTGVDL
IIDDTPEAVIVSCFDPVRREIARLALEKLITDGRIHPARIEEMVNKATKEVNSIIKSEGE
RATFEVGIHNLHPELVKLLGRLRYRTSYGQNVLNHSIQVAHLAGLMAGELGLNVKLAKRA
GLLHDIGKALDHEFEGTHVDIGITVLKKYKETDAVINGMAAHHGDYEPQSAEAVLIAAAD
ALSAARPGARRETLDVYIKRLETLENIANTTPGVEKSFAIQAGREIRIIANPNEIGDDSI
ALLAREISKKIESELEYPGQIKVNVVRETRAIDYAK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgactccgacagccgtgattttaattgttgtagttggtgcagttacccttattgcggga
ctgttaatcggatatatttacagaaaaagcgttggcgaaaagataattggaaacgcagaa
caggttgcacagaatttgattctagatgcagagaaaaaatccgaaacaattgagaaggaa
attacgttagaagccaaagaggaagcgcatcgtgtaagaaacgatgtagaaaaggaagta
agagaaagaagaaatgagcttacacgttcagaaagacgaatagctcagaaggaagagacg
gtagatcgcaagcttagcagcatagagaggaaagaagaagatctagcgaaaaagcaaatc
gagatatcgaagcaaaaggaagagctagactcattccttgagaagagaattgttgaactt
gagagaatttcaggattgacagccgaagaggcgaagcagctattgttaaccgagatagaa
aaggacgtaagacacgacgcatctttgatgattaaagacatcgagatgaaggctaaggaa
gaagctgacattaaggctaaagatatcatagtcggcgctattcaaagatgtgcagctgat
caggttgcagaatctacagtatctgttgtccagctacctaacgatgagatgaagggtaga
attattggtagagaaggaagaaatatcagagcgatagagactcagacaggtgttgatcta
atcattgacgatacaccagaggccgtaatcgtctcatgttttgacccagtgagaagagag
atcgcaagacttgcgcttgagaagctaatcactgacggaagaatccatccagctcgtata
gaggagatggtaaacaaggcaactaaggaagtaaacagcataattaaatctgaaggtgag
agagctacttttgaggtcggtatacacaaccttcatccagagcttgtaaagcttctagga
cgtttgagatatagaacatcatacggacagaacgtactaaaccattcaattcaggttgca
caccttgcaggacttatggctggtgagctaggactaaatgttaagcttgcaaaaagagct
ggtctgcttcacgacataggtaaggctttagaccatgagtttgagggtacacacgtagat
atcggtataactgtacttaagaagtacaaggagactgatgctgttatcaacggtatggct
gctcaccatggtgattatgagccacagtcagcagaagcagttttgatagctgcagctgat
gctctttcagcagctagacctggtgctcgtagagaaactctagatgtatatatcaagaga
cttgagacacttgagaatatagcaaatacaactcctggagttgagaagtcatttgcaatt
caggcaggaagagaaattcgtatcattgcaaatcctaatgagataggtgatgacagcatc
gcactactcgcaagagaaatctccaagaagattgaatctgaactagaatatccaggacag
attaaggtaaacgttgtgagagagactcgtgcaatagattacgcaaaataa
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