Euzebya pacifica: DVS28_a0155
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Entry
DVS28_a0155 CDS
T05999
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
euz
Euzebya pacifica
Pathway
euz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
euz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DVS28_a0155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
euz03019
]
DVS28_a0155
03400 DNA repair and recombination proteins [BR:
euz03400
]
DVS28_a0155
Enzymes [BR:
euz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVS28_a0155
Messenger RNA biogenesis [BR:
euz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DVS28_a0155
DNA repair and recombination proteins [BR:
euz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DVS28_a0155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AXV04863
UniProt:
A0A346XRL6
LinkDB
All DBs
Position
complement(169699..171405)
Genome browser
AA seq
568 aa
AA seq
DB search
MSDNHAADERTADQTADDHVPADEERELLLEAVARAALGHDELRPGQAEAASAVVAGRDV
LAVMPTGSGKSAIYQLAGSLASGTVIVISPLLALQRDQIAALDGRMGGARALNSTLTTKE
HRELLDAAEAGEVRFLLMAPEQLANPDTLSRLAEIGVALMVVDEAHCIASWGHDFRPEYL
MLGERRHALGDPPVLALTATASPPVRREIAEELRMEDPVVVTAGVLRPNIRLEVVDTAER
DRAFDLAVEQAERLDGTGIVYVPTRAGAADMAARIDRPDRPAVAYHAGLSRDEREDVERR
FSSGEHMVVVATTAFGMGIDRPDVRFVVHHQAPDSLDSYYQELGRAGRDGEPADAVLVRT
VADGSARAFQGGTTVVERSTFDRVVRGVSAIDQPVEVEAIRDDLGLPRTHLMIVVEHLSR
LDAVHVDHEGQLSWTDGTDPEDAVERAHGLHERDQSLSRSARQMLAQYLDTSSCRWRFIA
SYFGADIDGDCGRCDVCERPGHAEAHPSEADPAHGFRTGQEVRHRSFGEGIVEGVDGDRL
TVVFDEVGHRSLSAKVLADNDLLVGPAD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacaaccacgccgccgacgagcgcaccgccgatcagaccgccgacgaccacgtc
cctgccgacgaggaacgcgagctgctgctggaggcggtggctcgggccgccctcggccac
gacgagctccgtcccggtcaggccgaggccgccagcgccgtggtggccggccgcgacgtc
ctggccgtcatgccgaccgggtcgggcaagtccgcgatctaccagctggccgggtcgctg
gcctccggcacggtcatcgtcatctcgccgctgctggccctgcaacgcgaccagatcgcc
gcgctcgacggccgcatgggtggggcgcgggccctgaactccacgctgaccacgaaggaa
caccgcgagctgctggacgccgccgaggcgggcgaggtccggttcctgctcatggcgccc
gagcagctggccaaccccgacaccctgtcccgcctggccgagatcggcgtggcgctgatg
gtcgtcgacgaagcccactgcatcgccagctgggggcacgacttccgtcccgagtacctg
atgctcggcgaacgacgccacgcgctgggcgatccgccggtgctggccctgaccgccacc
gcgtcgccgccggtccgacgggagatcgcggaggagctgcgcatggaggacccggtcgtg
gtcaccgccggggtcctgcggcccaacatccgcctggaggtcgtcgacaccgccgagcgc
gaccgcgcgttcgacctcgcggtcgagcaggccgagcggctggacggcaccggcatcgtc
tacgtccccacccgcgccggggcagcggacatggccgcccggatcgaccgtccggaccgg
cccgccgtcgcctaccacgcgggcttgtcccgggacgagcgcgaggacgtcgaacgccgg
ttctccagtggagaacacatggtcgtcgtcgccaccaccgccttcgggatgggtatcgac
cggcccgatgtgcggttcgtcgtgcaccaccaggcccccgactccctcgacagctactac
caggagctcggtcgtgccggccgcgacggcgagccggccgacgccgtgctcgtgcggacc
gtggccgacggcagcgcacgtgccttccagggcggcacgaccgtcgtggaacgatcgacg
ttcgaccgggtcgtccgcggggtgtccgccatcgaccagcccgtggaggtcgaggcgatc
agggacgacctcggcctgccccgcacccacctgatgatcgtcgtcgaacacctctcacgg
ctcgacgcggtccacgtcgaccacgagggccagctgtcgtggaccgacgggaccgacccg
gaggacgccgtcgagcgggcacacgggctgcacgaacgcgaccagagcctgtcccggtcg
gcccgccagatgctggcccagtacctcgacacctccagctgcaggtggcggttcatcgcc
agctacttcggtgccgacatcgacggcgactgcggccgctgcgacgtgtgcgagcggccc
gggcacgccgaggcccacccatccgaggccgatccggcgcacgggttccgcacggggcag
gaggtgcgccaccgctcgttcggcgaggggatcgtcgagggcgtcgacggcgaccggctg
accgtggtcttcgacgaggtcggccaccgttccctctccgcgaaggtcctcgccgacaac
gacctgctggtcggcccggccgactaa
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